==182614== Memcheck, a memory error detector ==182614== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==182614== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==182614== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==182614== Parent PID: 175495 ==182614== ==182614== ==182614== FILE DESCRIPTORS: 9 open (3 std) at exit. ==182614== Open file descriptor 12: ==182614== at 0xFD3722D: pipe (pipe.c:29) ==182614== by 0x1976807D: ??? ==182614== by 0x14D764CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==182614== by 0x11638418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==182614== by 0x115D1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==182614== by 0x102C8D38: PetscInitialize (pinit.c:924) ==182614== by 0xF55623F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==182614== by 0xF55628D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==182614== by 0x135852: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==182614== by 0x1303E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==182614== by 0x133068: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==182614== by 0x132F08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==182614== by 0x13359F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==182614== by 0x12E7D5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==182614== ==182614== Open file descriptor 8: /dev/shm/open_mpi.0000 ==182614== at 0xFD3BBCC: __open_nocancel (open64_nocancel.c:39) ==182614== by 0xFCBFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==182614== by 0xF58B822: ??? ==182614== by 0xF58B96F: ??? ==182614== by 0x14E1B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==182614== by 0x14E1B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==182614== by 0x14DD1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==182614== by 0x14D762DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==182614== by 0x11638418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==182614== by 0x115D1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==182614== by 0x102C8D38: PetscInitialize (pinit.c:924) ==182614== by 0xF55623F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==182614== by 0xF55628D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==182614== by 0x135852: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==182614== by 0x1303E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==182614== by 0x133068: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==182614== by 0x132F08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==182614== by 0x13359F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==182614== by 0x12E7D5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==182614== ==182614== Open file descriptor 116: ==182614== ==182614== ==182614== Open file descriptor 112: ==182614== ==182614== ==182614== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==182614== ==182614== ==182614== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==182614== ==182614== ==182614== ==182614== HEAP SUMMARY: ==182614== in use at exit: 700,754 bytes in 9,378 blocks ==182614== total heap usage: 2,361,692 allocs, 2,352,314 frees, 1,791,954,565 bytes allocated ==182614== ==182614== LEAK SUMMARY: ==182614== definitely lost: 0 bytes in 0 blocks ==182614== indirectly lost: 0 bytes in 0 blocks ==182614== possibly lost: 0 bytes in 0 blocks ==182614== still reachable: 56 bytes in 3 blocks ==182614== suppressed: 700,698 bytes in 9,375 blocks ==182614== Reachable blocks (those to which a pointer was found) are not shown. ==182614== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==182614== ==182614== For lists of detected and suppressed errors, rerun with: -s ==182614== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)