==191023== Memcheck, a memory error detector ==191023== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==191023== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==191023== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDeltaNotchSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==191023== Parent PID: 175495 ==191023== ==191023== ==191023== FILE DESCRIPTORS: 9 open (3 std) at exit. ==191023== Open file descriptor 12: ==191023== at 0xF8B122D: pipe (pipe.c:29) ==191023== by 0x1976707D: ??? ==191023== by 0x14D704CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==191023== by 0x11551418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==191023== by 0x114EAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==191023== by 0x101E1D38: PetscInitialize (pinit.c:924) ==191023== by 0xF1B923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==191023== by 0xF1B928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==191023== by 0x121CE8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==191023== by 0x11D553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==191023== by 0x11F870: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==191023== by 0x11F76B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==191023== by 0x11FD7F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==191023== by 0x11BD55: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==191023== ==191023== Open file descriptor 8: /dev/shm/open_mpi.0000 ==191023== at 0xF8B5BCC: __open_nocancel (open64_nocancel.c:39) ==191023== by 0xF839C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==191023== by 0xF1EE822: ??? ==191023== by 0xF1EE96F: ??? ==191023== by 0x14E156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==191023== by 0x14E15938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==191023== by 0x14DCB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==191023== by 0x14D702DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==191023== by 0x11551418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==191023== by 0x114EAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==191023== by 0x101E1D38: PetscInitialize (pinit.c:924) ==191023== by 0xF1B923F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==191023== by 0xF1B928D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==191023== by 0x121CE8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==191023== by 0x11D553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==191023== by 0x11F870: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==191023== by 0x11F76B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==191023== by 0x11FD7F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==191023== by 0x11BD55: main (TestRunningDeltaNotchSimulationsTutorial.cpp:18) ==191023== ==191023== Open file descriptor 116: ==191023== ==191023== ==191023== Open file descriptor 112: ==191023== ==191023== ==191023== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDeltaNotchSimulationsTutorial_valgrind.txt ==191023== ==191023== ==191023== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==191023== ==191023== ==191023== ==191023== HEAP SUMMARY: ==191023== in use at exit: 700,686 bytes in 9,374 blocks ==191023== total heap usage: 5,180,821 allocs, 5,171,447 frees, 1,793,737,712 bytes allocated ==191023== ==191023== LEAK SUMMARY: ==191023== definitely lost: 0 bytes in 0 blocks ==191023== indirectly lost: 0 bytes in 0 blocks ==191023== possibly lost: 0 bytes in 0 blocks ==191023== still reachable: 56 bytes in 3 blocks ==191023== suppressed: 700,630 bytes in 9,371 blocks ==191023== Reachable blocks (those to which a pointer was found) are not shown. ==191023== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==191023== ==191023== For lists of detected and suppressed errors, rerun with: -s ==191023== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)