==443571== Memcheck, a memory error detector ==443571== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==443571== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==443571== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningMeshBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==443571== Parent PID: 428120 ==443571== ==443571== ==443571== FILE DESCRIPTORS: 9 open (3 std) at exit. ==443571== Open file descriptor 12: ==443571== at 0x1000522D: pipe (pipe.c:29) ==443571== by 0x18A0507D: ??? ==443571== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==443571== by 0xF90D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==443571== by 0xF8A6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==443571== by 0xE57DD38: PetscInitialize (pinit.c:924) ==443571== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==443571== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==443571== by 0x121289: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==443571== by 0x11C86D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==443571== by 0x11EE5C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==443571== by 0x11ECFC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==443571== by 0x11F393: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==443571== by 0x11AC95: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==443571== ==443571== Open file descriptor 8: /dev/shm/open_mpi.0000 ==443571== at 0x10009BCC: __open_nocancel (open64_nocancel.c:39) ==443571== by 0xFF8DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==443571== by 0xF807822: ??? ==443571== by 0xF80796F: ??? ==443571== by 0x1400D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==443571== by 0x1400D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==443571== by 0x13FC3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==443571== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==443571== by 0xF90D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==443571== by 0xF8A6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==443571== by 0xE57DD38: PetscInitialize (pinit.c:924) ==443571== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==443571== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==443571== by 0x121289: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==443571== by 0x11C86D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==443571== by 0x11EE5C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==443571== by 0x11ECFC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==443571== by 0x11F393: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==443571== by 0x11AC95: main (TestRunningMeshBasedSimulationsTutorial.cpp:19) ==443571== ==443571== Open file descriptor 114: ==443571== ==443571== ==443571== Open file descriptor 111: ==443571== ==443571== ==443571== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedSimulationsTutorial_valgrind.txt ==443571== ==443571== ==443571== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==443571== ==443571== ==443571== ==443571== HEAP SUMMARY: ==443571== in use at exit: 700,754 bytes in 9,378 blocks ==443571== total heap usage: 3,339,549 allocs, 3,330,171 frees, 2,282,263,847 bytes allocated ==443571== ==443571== LEAK SUMMARY: ==443571== definitely lost: 0 bytes in 0 blocks ==443571== indirectly lost: 0 bytes in 0 blocks ==443571== possibly lost: 0 bytes in 0 blocks ==443571== still reachable: 56 bytes in 3 blocks ==443571== suppressed: 700,698 bytes in 9,375 blocks ==443571== Reachable blocks (those to which a pointer was found) are not shown. ==443571== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==443571== ==443571== For lists of detected and suppressed errors, rerun with: -s ==443571== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)