==486609== Memcheck, a memory error detector ==486609== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==486609== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==486609== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedCellProperties -malloc_debug -malloc_dump -memory_info ==486609== Parent PID: 485460 ==486609== ==486609== ==486609== FILE DESCRIPTORS: 9 open (3 std) at exit. ==486609== Open file descriptor 12: ==486609== at 0xE44922D: pipe (pipe.c:29) ==486609== by 0x18A0407D: ??? ==486609== by 0x12F554CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==486609== by 0xE098418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==486609== by 0xE031D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==486609== by 0xCD28D38: PetscInitialize (pinit.c:924) ==486609== by 0xCB9C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==486609== by 0xCB9C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==486609== by 0x12F18B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==486609== by 0x129EE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==486609== by 0x12CAE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==486609== by 0x12C980: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==486609== by 0x12D017: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==486609== by 0x128305: main (TestCellBasedCellProperties.cpp:19) ==486609== ==486609== Open file descriptor 8: /dev/shm/open_mpi.0000 ==486609== at 0xE44DBCC: __open_nocancel (open64_nocancel.c:39) ==486609== by 0xE3D1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==486609== by 0xCBD0822: ??? ==486609== by 0xCBD096F: ??? ==486609== by 0x12FFA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==486609== by 0x12FFA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==486609== by 0x12FB0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==486609== by 0x12F552DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==486609== by 0xE098418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==486609== by 0xE031D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==486609== by 0xCD28D38: PetscInitialize (pinit.c:924) ==486609== by 0xCB9C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==486609== by 0xCB9C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==486609== by 0x12F18B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==486609== by 0x129EE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==486609== by 0x12CAE0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==486609== by 0x12C980: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==486609== by 0x12D017: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==486609== by 0x128305: main (TestCellBasedCellProperties.cpp:19) ==486609== ==486609== Open file descriptor 116: ==486609== ==486609== ==486609== Open file descriptor 112: ==486609== ==486609== ==486609== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedCellProperties_valgrind.txt ==486609== ==486609== ==486609== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==486609== ==486609== ==486609== ==486609== HEAP SUMMARY: ==486609== in use at exit: 700,754 bytes in 9,378 blocks ==486609== total heap usage: 55,161 allocs, 45,783 frees, 1,354,023,360 bytes allocated ==486609== ==486609== LEAK SUMMARY: ==486609== definitely lost: 0 bytes in 0 blocks ==486609== indirectly lost: 0 bytes in 0 blocks ==486609== possibly lost: 0 bytes in 0 blocks ==486609== still reachable: 56 bytes in 3 blocks ==486609== suppressed: 700,698 bytes in 9,375 blocks ==486609== Reachable blocks (those to which a pointer was found) are not shown. ==486609== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==486609== ==486609== For lists of detected and suppressed errors, rerun with: -s ==486609== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)