==486669== Memcheck, a memory error detector ==486669== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==486669== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==486669== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellMutationStates -malloc_debug -malloc_dump -memory_info ==486669== Parent PID: 485460 ==486669== ==486669== ==486669== FILE DESCRIPTORS: 9 open (3 std) at exit. ==486669== Open file descriptor 12: ==486669== at 0xE44922D: pipe (pipe.c:29) ==486669== by 0x18A0407D: ??? ==486669== by 0x12F554CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==486669== by 0xE098418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==486669== by 0xE031D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==486669== by 0xCD28D38: PetscInitialize (pinit.c:924) ==486669== by 0xCB9C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==486669== by 0xCB9C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==486669== by 0x12BE69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==486669== by 0x126E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==486669== by 0x129792: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==486669== by 0x129632: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==486669== by 0x129CC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==486669== by 0x125225: main (TestCellMutationStates.cpp:19) ==486669== ==486669== Open file descriptor 8: /dev/shm/open_mpi.0000 ==486669== at 0xE44DBCC: __open_nocancel (open64_nocancel.c:39) ==486669== by 0xE3D1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==486669== by 0xCBD0822: ??? ==486669== by 0xCBD096F: ??? ==486669== by 0x12FFA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==486669== by 0x12FFA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==486669== by 0x12FB0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==486669== by 0x12F552DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==486669== by 0xE098418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==486669== by 0xE031D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==486669== by 0xCD28D38: PetscInitialize (pinit.c:924) ==486669== by 0xCB9C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==486669== by 0xCB9C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==486669== by 0x12BE69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==486669== by 0x126E09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==486669== by 0x129792: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==486669== by 0x129632: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==486669== by 0x129CC9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==486669== by 0x125225: main (TestCellMutationStates.cpp:19) ==486669== ==486669== Open file descriptor 116: ==486669== ==486669== ==486669== Open file descriptor 112: ==486669== ==486669== ==486669== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellMutationStates_valgrind.txt ==486669== ==486669== ==486669== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==486669== ==486669== ==486669== ==486669== HEAP SUMMARY: ==486669== in use at exit: 700,754 bytes in 9,378 blocks ==486669== total heap usage: 54,904 allocs, 45,526 frees, 1,353,951,761 bytes allocated ==486669== ==486669== LEAK SUMMARY: ==486669== definitely lost: 0 bytes in 0 blocks ==486669== indirectly lost: 0 bytes in 0 blocks ==486669== possibly lost: 0 bytes in 0 blocks ==486669== still reachable: 56 bytes in 3 blocks ==486669== suppressed: 700,698 bytes in 9,375 blocks ==486669== Reachable blocks (those to which a pointer was found) are not shown. ==486669== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==486669== ==486669== For lists of detected and suppressed errors, rerun with: -s ==486669== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)