==500531== Memcheck, a memory error detector ==500531== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==500531== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==500531== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial -malloc_debug -malloc_dump -memory_info ==500531== Parent PID: 485460 ==500531== ==500531== ==500531== FILE DESCRIPTORS: 9 open (3 std) at exit. ==500531== Open file descriptor 12: ==500531== at 0x1004722D: pipe (pipe.c:29) ==500531== by 0x18A0507D: ??? ==500531== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==500531== by 0xF94F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==500531== by 0xF8E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==500531== by 0xE5DFD38: PetscInitialize (pinit.c:924) ==500531== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==500531== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==500531== by 0x1305D9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==500531== by 0x12B9AF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==500531== by 0x12DF00: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==500531== by 0x12DDFB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==500531== by 0x12E40F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==500531== by 0x12A1A5: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==500531== ==500531== Open file descriptor 8: /dev/shm/open_mpi.0000 ==500531== at 0x1004BBCC: __open_nocancel (open64_nocancel.c:39) ==500531== by 0xFFCFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==500531== by 0xE489822: ??? ==500531== by 0xE48996F: ??? ==500531== by 0x1400F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==500531== by 0x1400F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==500531== by 0x13FC5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==500531== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==500531== by 0xF94F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==500531== by 0xF8E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==500531== by 0xE5DFD38: PetscInitialize (pinit.c:924) ==500531== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==500531== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==500531== by 0x1305D9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==500531== by 0x12B9AF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==500531== by 0x12DF00: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==500531== by 0x12DDFB: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==500531== by 0x12E40F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==500531== by 0x12A1A5: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==500531== ==500531== Open file descriptor 116: ==500531== ==500531== ==500531== Open file descriptor 112: ==500531== ==500531== ==500531== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial_valgrind.txt ==500531== ==500531== ==500531== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==500531== ==500531== ==500531== ==500531== HEAP SUMMARY: ==500531== in use at exit: 700,754 bytes in 9,378 blocks ==500531== total heap usage: 515,891 allocs, 506,513 frees, 1,666,900,408 bytes allocated ==500531== ==500531== LEAK SUMMARY: ==500531== definitely lost: 0 bytes in 0 blocks ==500531== indirectly lost: 0 bytes in 0 blocks ==500531== possibly lost: 0 bytes in 0 blocks ==500531== still reachable: 56 bytes in 3 blocks ==500531== suppressed: 700,698 bytes in 9,375 blocks ==500531== Reachable blocks (those to which a pointer was found) are not shown. ==500531== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==500531== ==500531== For lists of detected and suppressed errors, rerun with: -s ==500531== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)