==500552== Memcheck, a memory error detector ==500552== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==500552== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==500552== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellCycleModelTutorial -malloc_debug -malloc_dump -memory_info ==500552== Parent PID: 485460 ==500552== ==500552== ==500552== FILE DESCRIPTORS: 9 open (3 std) at exit. ==500552== Open file descriptor 12: ==500552== at 0x1012E22D: pipe (pipe.c:29) ==500552== by 0x18A0507D: ??? ==500552== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==500552== by 0xF94F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==500552== by 0xF8E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==500552== by 0xE5DFD38: PetscInitialize (pinit.c:924) ==500552== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==500552== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==500552== by 0x2258B3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==500552== by 0x21F2CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==500552== by 0x222B80: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==500552== by 0x222A21: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==500552== by 0x2230B7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==500552== by 0x21BBF5: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==500552== ==500552== Open file descriptor 8: /dev/shm/open_mpi.0000 ==500552== at 0x10132BCC: __open_nocancel (open64_nocancel.c:39) ==500552== by 0x100B6C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==500552== by 0xE489822: ??? ==500552== by 0xE48996F: ??? ==500552== by 0x1400F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==500552== by 0x1400F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==500552== by 0x13FC5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==500552== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==500552== by 0xF94F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==500552== by 0xF8E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==500552== by 0xE5DFD38: PetscInitialize (pinit.c:924) ==500552== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==500552== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==500552== by 0x2258B3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==500552== by 0x21F2CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==500552== by 0x222B80: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==500552== by 0x222A21: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==500552== by 0x2230B7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==500552== by 0x21BBF5: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==500552== ==500552== Open file descriptor 116: ==500552== ==500552== ==500552== Open file descriptor 112: ==500552== ==500552== ==500552== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellCycleModelTutorial_valgrind.txt ==500552== ==500552== ==500552== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==500552== ==500552== ==500552== ==500552== HEAP SUMMARY: ==500552== in use at exit: 700,686 bytes in 9,374 blocks ==500552== total heap usage: 8,978,651 allocs, 8,969,277 frees, 2,199,791,211 bytes allocated ==500552== ==500552== LEAK SUMMARY: ==500552== definitely lost: 0 bytes in 0 blocks ==500552== indirectly lost: 0 bytes in 0 blocks ==500552== possibly lost: 0 bytes in 0 blocks ==500552== still reachable: 56 bytes in 3 blocks ==500552== suppressed: 700,630 bytes in 9,371 blocks ==500552== Reachable blocks (those to which a pointer was found) are not shown. ==500552== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==500552== ==500552== For lists of detected and suppressed errors, rerun with: -s ==500552== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)