==487651== Memcheck, a memory error detector ==487651== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==487651== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==487651== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithBuskeForces -malloc_debug -malloc_dump -memory_info ==487651== Parent PID: 485460 ==487651== ==487651== ==487651== FILE DESCRIPTORS: 9 open (3 std) at exit. ==487651== Open file descriptor 12: ==487651== at 0xEC3522D: pipe (pipe.c:29) ==487651== by 0x18A0507D: ??? ==487651== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==487651== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==487651== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==487651== by 0xF565D38: PetscInitialize (pinit.c:924) ==487651== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==487651== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==487651== by 0x1231BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==487651== by 0x11E5B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==487651== by 0x120AF8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==487651== by 0x1209F3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==487651== by 0x121007: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==487651== by 0x11CDB5: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==487651== ==487651== Open file descriptor 8: /dev/shm/open_mpi.0000 ==487651== at 0xEC39BCC: __open_nocancel (open64_nocancel.c:39) ==487651== by 0xEBBDC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==487651== by 0xE489822: ??? ==487651== by 0xE48996F: ??? ==487651== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==487651== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==487651== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==487651== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==487651== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==487651== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==487651== by 0xF565D38: PetscInitialize (pinit.c:924) ==487651== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==487651== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==487651== by 0x1231BA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==487651== by 0x11E5B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==487651== by 0x120AF8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==487651== by 0x1209F3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==487651== by 0x121007: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==487651== by 0x11CDB5: main (TestOffLatticeSimulationWithBuskeForces.cpp:18) ==487651== ==487651== Open file descriptor 116: ==487651== ==487651== ==487651== Open file descriptor 112: ==487651== ==487651== ==487651== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithBuskeForces_valgrind.txt ==487651== ==487651== ==487651== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==487651== ==487651== ==487651== ==487651== HEAP SUMMARY: ==487651== in use at exit: 700,686 bytes in 9,374 blocks ==487651== total heap usage: 3,595,285 allocs, 3,585,911 frees, 4,497,080,281 bytes allocated ==487651== ==487651== LEAK SUMMARY: ==487651== definitely lost: 0 bytes in 0 blocks ==487651== indirectly lost: 0 bytes in 0 blocks ==487651== possibly lost: 0 bytes in 0 blocks ==487651== still reachable: 56 bytes in 3 blocks ==487651== suppressed: 700,630 bytes in 9,371 blocks ==487651== Reachable blocks (those to which a pointer was found) are not shown. ==487651== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==487651== ==487651== For lists of detected and suppressed errors, rerun with: -s ==487651== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)