==487657== Memcheck, a memory error detector ==487657== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==487657== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==487657== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==487657== Parent PID: 485460 ==487657== ==487657== ==487657== FILE DESCRIPTORS: 9 open (3 std) at exit. ==487657== Open file descriptor 12: ==487657== at 0xEC7922D: pipe (pipe.c:29) ==487657== by 0x18A0507D: ??? ==487657== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==487657== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==487657== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==487657== by 0xF565D38: PetscInitialize (pinit.c:924) ==487657== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==487657== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==487657== by 0x21262C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==487657== by 0x209E39: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==487657== by 0x20DA88: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==487657== by 0x20D928: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==487657== by 0x20DFBF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==487657== by 0x208255: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==487657== ==487657== Open file descriptor 8: /dev/shm/open_mpi.0000 ==487657== at 0xEC7DBCC: __open_nocancel (open64_nocancel.c:39) ==487657== by 0xEC01C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==487657== by 0xE489822: ??? ==487657== by 0xE48996F: ??? ==487657== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==487657== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==487657== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==487657== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==487657== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==487657== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==487657== by 0xF565D38: PetscInitialize (pinit.c:924) ==487657== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==487657== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==487657== by 0x21262C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==487657== by 0x209E39: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==487657== by 0x20DA88: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==487657== by 0x20D928: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==487657== by 0x20DFBF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==487657== by 0x208255: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==487657== ==487657== Open file descriptor 116: ==487657== ==487657== ==487657== Open file descriptor 112: ==487657== ==487657== ==487657== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==487657== ==487657== ==487657== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==487657== ==487657== ==487657== ==487657== HEAP SUMMARY: ==487657== in use at exit: 700,718 bytes in 9,375 blocks ==487657== total heap usage: 17,828,116 allocs, 17,818,741 frees, 30,061,776,492 bytes allocated ==487657== ==487657== LEAK SUMMARY: ==487657== definitely lost: 0 bytes in 0 blocks ==487657== indirectly lost: 0 bytes in 0 blocks ==487657== possibly lost: 0 bytes in 0 blocks ==487657== still reachable: 88 bytes in 4 blocks ==487657== suppressed: 700,630 bytes in 9,371 blocks ==487657== Reachable blocks (those to which a pointer was found) are not shown. ==487657== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==487657== ==487657== For lists of detected and suppressed errors, rerun with: -s ==487657== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)