==500264== Memcheck, a memory error detector ==500264== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==500264== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==500264== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==500264== Parent PID: 485460 ==500264== ==500264== ==500264== FILE DESCRIPTORS: 9 open (3 std) at exit. ==500264== Open file descriptor 12: ==500264== at 0xEC7922D: pipe (pipe.c:29) ==500264== by 0x18A0507D: ??? ==500264== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==500264== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==500264== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==500264== by 0xF565D38: PetscInitialize (pinit.c:924) ==500264== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==500264== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==500264== by 0x1D6650: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==500264== by 0x1CE199: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==500264== by 0x1D1A18: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==500264== by 0x1D18B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==500264== by 0x1D1F4F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==500264== by 0x1CC5B5: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==500264== ==500264== Open file descriptor 8: /dev/shm/open_mpi.0000 ==500264== at 0xEC7DBCC: __open_nocancel (open64_nocancel.c:39) ==500264== by 0xEC01C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==500264== by 0xE489822: ??? ==500264== by 0xE48996F: ??? ==500264== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==500264== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==500264== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==500264== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==500264== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==500264== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==500264== by 0xF565D38: PetscInitialize (pinit.c:924) ==500264== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==500264== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==500264== by 0x1D6650: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==500264== by 0x1CE199: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==500264== by 0x1D1A18: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==500264== by 0x1D18B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==500264== by 0x1D1F4F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==500264== by 0x1CC5B5: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==500264== ==500264== Open file descriptor 116: ==500264== ==500264== ==500264== Open file descriptor 112: ==500264== ==500264== ==500264== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==500264== ==500264== ==500264== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==500264== ==500264== ==500264== ==500264== HEAP SUMMARY: ==500264== in use at exit: 700,702 bytes in 9,375 blocks ==500264== total heap usage: 11,683,895 allocs, 11,674,520 frees, 2,223,630,276 bytes allocated ==500264== ==500264== LEAK SUMMARY: ==500264== definitely lost: 0 bytes in 0 blocks ==500264== indirectly lost: 0 bytes in 0 blocks ==500264== possibly lost: 0 bytes in 0 blocks ==500264== still reachable: 72 bytes in 4 blocks ==500264== suppressed: 700,630 bytes in 9,371 blocks ==500264== Reachable blocks (those to which a pointer was found) are not shown. ==500264== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==500264== ==500264== For lists of detected and suppressed errors, rerun with: -s ==500264== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)