==500905== Memcheck, a memory error detector ==500905== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==500905== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==500905== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningNodeBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==500905== Parent PID: 485460 ==500905== ==500905== ==500905== FILE DESCRIPTORS: 9 open (3 std) at exit. ==500905== Open file descriptor 12: ==500905== at 0xEC3522D: pipe (pipe.c:29) ==500905== by 0x18A0507D: ??? ==500905== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==500905== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==500905== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==500905== by 0xF565D38: PetscInitialize (pinit.c:924) ==500905== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==500905== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==500905== by 0x12C658: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==500905== by 0x127BCD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==500905== by 0x12A27C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==500905== by 0x12A11C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==500905== by 0x12A7B3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==500905== by 0x125FF5: main (TestRunningNodeBasedSimulationsTutorial.cpp:19) ==500905== ==500905== Open file descriptor 8: /dev/shm/open_mpi.0000 ==500905== at 0xEC39BCC: __open_nocancel (open64_nocancel.c:39) ==500905== by 0xEBBDC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==500905== by 0xE489822: ??? ==500905== by 0xE48996F: ??? ==500905== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==500905== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==500905== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==500905== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==500905== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==500905== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==500905== by 0xF565D38: PetscInitialize (pinit.c:924) ==500905== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==500905== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==500905== by 0x12C658: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==500905== by 0x127BCD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==500905== by 0x12A27C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==500905== by 0x12A11C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==500905== by 0x12A7B3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==500905== by 0x125FF5: main (TestRunningNodeBasedSimulationsTutorial.cpp:19) ==500905== ==500905== Open file descriptor 116: ==500905== ==500905== ==500905== Open file descriptor 112: ==500905== ==500905== ==500905== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningNodeBasedSimulationsTutorial_valgrind.txt ==500905== ==500905== ==500905== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==500905== ==500905== ==500905== ==500905== HEAP SUMMARY: ==500905== in use at exit: 700,754 bytes in 9,378 blocks ==500905== total heap usage: 674,100 allocs, 664,722 frees, 1,740,557,853 bytes allocated ==500905== ==500905== LEAK SUMMARY: ==500905== definitely lost: 0 bytes in 0 blocks ==500905== indirectly lost: 0 bytes in 0 blocks ==500905== possibly lost: 0 bytes in 0 blocks ==500905== still reachable: 56 bytes in 3 blocks ==500905== suppressed: 700,698 bytes in 9,375 blocks ==500905== Reachable blocks (those to which a pointer was found) are not shown. ==500905== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==500905== ==500905== For lists of detected and suppressed errors, rerun with: -s ==500905== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)