==486803== Memcheck, a memory error detector ==486803== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==486803== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==486803== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==486803== Parent PID: 485460 ==486803== ==486803== ==486803== FILE DESCRIPTORS: 9 open (3 std) at exit. ==486803== Open file descriptor 12: ==486803== at 0x103A222D: pipe (pipe.c:29) ==486803== by 0x18A0407D: ??? ==486803== by 0x13F674CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==486803== by 0xFCAA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==486803== by 0xFC43D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==486803== by 0xE91AD38: PetscInitialize (pinit.c:924) ==486803== by 0xE7F2153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==486803== by 0xE7F21A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==486803== by 0x1284B9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==486803== by 0x123A33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==486803== by 0x125FAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==486803== by 0x125EA5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==486803== by 0x1264B9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==486803== by 0x122235: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==486803== ==486803== Open file descriptor 8: /dev/shm/open_mpi.0000 ==486803== at 0x103A6BCC: __open_nocancel (open64_nocancel.c:39) ==486803== by 0x1032AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==486803== by 0xFBA4822: ??? ==486803== by 0xFBA496F: ??? ==486803== by 0x1400C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==486803== by 0x1400C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==486803== by 0x13FC2922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==486803== by 0x13F672DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==486803== by 0xFCAA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==486803== by 0xFC43D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==486803== by 0xE91AD38: PetscInitialize (pinit.c:924) ==486803== by 0xE7F2153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==486803== by 0xE7F21A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==486803== by 0x1284B9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==486803== by 0x123A33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==486803== by 0x125FAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==486803== by 0x125EA5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==486803== by 0x1264B9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==486803== by 0x122235: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==486803== ==486803== Open file descriptor 116: ==486803== ==486803== ==486803== Open file descriptor 112: ==486803== ==486803== ==486803== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==486803== ==486803== ==486803== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==486803== ==486803== ==486803== ==486803== HEAP SUMMARY: ==486803== in use at exit: 700,686 bytes in 9,374 blocks ==486803== total heap usage: 7,731,624 allocs, 7,722,250 frees, 2,197,419,316 bytes allocated ==486803== ==486803== LEAK SUMMARY: ==486803== definitely lost: 0 bytes in 0 blocks ==486803== indirectly lost: 0 bytes in 0 blocks ==486803== possibly lost: 0 bytes in 0 blocks ==486803== still reachable: 56 bytes in 3 blocks ==486803== suppressed: 700,630 bytes in 9,371 blocks ==486803== Reachable blocks (those to which a pointer was found) are not shown. ==486803== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==486803== ==486803== For lists of detected and suppressed errors, rerun with: -s ==486803== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)