==560388== Memcheck, a memory error detector ==560388== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==560388== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==560388== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCheckpointing -malloc_debug -malloc_dump -memory_info ==560388== Parent PID: 541561 ==560388== ==560388== ==560388== FILE DESCRIPTORS: 9 open (3 std) at exit. ==560388== Open file descriptor 12: ==560388== at 0xA41E22D: pipe (pipe.c:29) ==560388== by 0x13F8107D: ??? ==560388== by 0xF78D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==560388== by 0xBB16418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==560388== by 0xBAAFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==560388== by 0xA7A6D38: PetscInitialize (pinit.c:924) ==560388== by 0x9D09153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==560388== by 0x9D091A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==560388== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==560388== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==560388== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==560388== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==560388== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==560388== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==560388== ==560388== Open file descriptor 8: /dev/shm/open_mpi.0000 ==560388== at 0xA422BCC: __open_nocancel (open64_nocancel.c:39) ==560388== by 0xA3A6C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==560388== by 0x9D3D822: ??? ==560388== by 0x9D3D96F: ??? ==560388== by 0xF8326DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==560388== by 0xF832938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==560388== by 0xF7E8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==560388== by 0xF78D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==560388== by 0xBB16418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==560388== by 0xBAAFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==560388== by 0xA7A6D38: PetscInitialize (pinit.c:924) ==560388== by 0x9D09153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==560388== by 0x9D091A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==560388== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==560388== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==560388== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==560388== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==560388== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==560388== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==560388== ==560388== Open file descriptor 116: ==560388== ==560388== ==560388== Open file descriptor 112: ==560388== ==560388== ==560388== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCheckpointing_valgrind.txt ==560388== ==560388== ==560388== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==560388== ==560388== ==560388== ==560388== HEAP SUMMARY: ==560388== in use at exit: 701,218 bytes in 9,387 blocks ==560388== total heap usage: 837,334 allocs, 827,947 frees, 1,458,877,052 bytes allocated ==560388== ==560388== LEAK SUMMARY: ==560388== definitely lost: 0 bytes in 0 blocks ==560388== indirectly lost: 0 bytes in 0 blocks ==560388== possibly lost: 0 bytes in 0 blocks ==560388== still reachable: 24 bytes in 2 blocks ==560388== suppressed: 701,194 bytes in 9,385 blocks ==560388== Reachable blocks (those to which a pointer was found) are not shown. ==560388== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==560388== ==560388== For lists of detected and suppressed errors, rerun with: -s ==560388== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 65 from 39)