==541564== Memcheck, a memory error detector ==541564== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==541564== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==541564== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==541564== Parent PID: 541561 ==541564== ==541564== ==541564== FILE DESCRIPTORS: 9 open (3 std) at exit. ==541564== Open file descriptor 12: ==541564== at 0x4CB022D: pipe (pipe.c:29) ==541564== by 0xAEA307D: ??? ==541564== by 0x89B74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==541564== by 0x626A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==541564== by 0x6203D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==541564== by 0x4EFAD38: PetscInitialize (pinit.c:924) ==541564== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==541564== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==541564== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==541564== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==541564== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==541564== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==541564== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==541564== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==541564== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==541564== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==541564== by 0x110C15: main (TestCitations.cpp:18) ==541564== ==541564== Open file descriptor 8: /dev/shm/open_mpi.0000 ==541564== at 0x4CB4BCC: __open_nocancel (open64_nocancel.c:39) ==541564== by 0x4C38C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==541564== by 0x492E822: ??? ==541564== by 0x492E96F: ??? ==541564== by 0x8A5C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==541564== by 0x8A5C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==541564== by 0x8A12922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==541564== by 0x89B72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==541564== by 0x626A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==541564== by 0x6203D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==541564== by 0x4EFAD38: PetscInitialize (pinit.c:924) ==541564== by 0x48FA153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==541564== by 0x48FA1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==541564== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==541564== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==541564== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==541564== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==541564== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==541564== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==541564== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==541564== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==541564== by 0x110C15: main (TestCitations.cpp:18) ==541564== ==541564== Open file descriptor 116: ==541564== ==541564== ==541564== Open file descriptor 112: ==541564== ==541564== ==541564== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==541564== ==541564== ==541564== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==541564== ==541564== ==541564== ==541564== HEAP SUMMARY: ==541564== in use at exit: 700,258 bytes in 9,377 blocks ==541564== total heap usage: 47,506 allocs, 38,129 frees, 1,353,400,569 bytes allocated ==541564== ==541564== LEAK SUMMARY: ==541564== definitely lost: 0 bytes in 0 blocks ==541564== indirectly lost: 0 bytes in 0 blocks ==541564== possibly lost: 0 bytes in 0 blocks ==541564== still reachable: 24 bytes in 2 blocks ==541564== suppressed: 700,234 bytes in 9,375 blocks ==541564== Reachable blocks (those to which a pointer was found) are not shown. ==541564== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==541564== ==541564== For lists of detected and suppressed errors, rerun with: -s ==541564== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)