==541812== Memcheck, a memory error detector ==541812== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==541812== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==541812== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/io/test/TestColumnDataReaderWriter -malloc_debug -malloc_dump -memory_info ==541812== Parent PID: 541561 ==541812== ==541812== ==541812== FILE DESCRIPTORS: 9 open (3 std) at exit. ==541812== Open file descriptor 12: ==541812== at 0x61D822D: pipe (pipe.c:29) ==541812== by 0xAF1607D: ??? ==541812== by 0x8A2A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==541812== by 0x5E27418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==541812== by 0x5DC0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==541812== by 0x4A95D38: PetscInitialize (pinit.c:924) ==541812== by 0x496D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==541812== by 0x496D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==541812== by 0x11A4DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==541812== by 0x1156CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==541812== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==541812== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==541812== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==541812== by 0x113AF5: main (TestColumnDataReaderWriter.cpp:19) ==541812== ==541812== Open file descriptor 8: /dev/shm/open_mpi.0000 ==541812== at 0x61DCBCC: __open_nocancel (open64_nocancel.c:39) ==541812== by 0x6160C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==541812== by 0x5D1F822: ??? ==541812== by 0x5D1F96F: ??? ==541812== by 0x8AD16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==541812== by 0x8AD1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==541812== by 0x8A87922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==541812== by 0x8A2A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==541812== by 0x5E27418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==541812== by 0x5DC0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==541812== by 0x4A95D38: PetscInitialize (pinit.c:924) ==541812== by 0x496D153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==541812== by 0x496D1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==541812== by 0x11A4DB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==541812== by 0x1156CD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==541812== by 0x118520: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==541812== by 0x1183C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==541812== by 0x118A57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==541812== by 0x113AF5: main (TestColumnDataReaderWriter.cpp:19) ==541812== ==541812== Open file descriptor 116: ==541812== ==541812== ==541812== Open file descriptor 112: ==541812== ==541812== ==541812== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestColumnDataReaderWriter_valgrind.txt ==541812== ==541812== ==541812== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==541812== ==541812== ==541812== ==541812== HEAP SUMMARY: ==541812== in use at exit: 700,274 bytes in 9,377 blocks ==541812== total heap usage: 64,210 allocs, 54,833 frees, 1,356,310,609 bytes allocated ==541812== ==541812== LEAK SUMMARY: ==541812== definitely lost: 0 bytes in 0 blocks ==541812== indirectly lost: 0 bytes in 0 blocks ==541812== possibly lost: 0 bytes in 0 blocks ==541812== still reachable: 24 bytes in 2 blocks ==541812== suppressed: 700,250 bytes in 9,375 blocks ==541812== Reachable blocks (those to which a pointer was found) are not shown. ==541812== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==541812== ==541812== For lists of detected and suppressed errors, rerun with: -s ==541812== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)