==557408== Memcheck, a memory error detector ==557408== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==557408== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==557408== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==557408== Parent PID: 541561 ==557408== ==557408== ==557408== FILE DESCRIPTORS: 9 open (3 std) at exit. ==557408== Open file descriptor 12: ==557408== at 0x1037122D: pipe (pipe.c:29) ==557408== by 0x18A0407D: ??? ==557408== by 0x13FC74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==557408== by 0xFB92418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557408== by 0xFB2BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557408== by 0xE822D38: PetscInitialize (pinit.c:924) ==557408== by 0xE698153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==557408== by 0xE6981A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==557408== by 0x261085: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==557408== by 0x2597AB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==557408== by 0x25E32E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==557408== by 0x25E1CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==557408== by 0x25E865: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==557408== by 0x255E15: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==557408== ==557408== Open file descriptor 8: /dev/shm/open_mpi.0000 ==557408== at 0x10375BCC: __open_nocancel (open64_nocancel.c:39) ==557408== by 0x102F9C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==557408== by 0xE6CC822: ??? ==557408== by 0xE6CC96F: ??? ==557408== by 0x1406C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==557408== by 0x1406C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==557408== by 0x14022922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==557408== by 0x13FC72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==557408== by 0xFB92418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557408== by 0xFB2BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557408== by 0xE822D38: PetscInitialize (pinit.c:924) ==557408== by 0xE698153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==557408== by 0xE6981A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==557408== by 0x261085: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==557408== by 0x2597AB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==557408== by 0x25E32E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==557408== by 0x25E1CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==557408== by 0x25E865: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==557408== by 0x255E15: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==557408== ==557408== Open file descriptor 116: ==557408== ==557408== ==557408== Open file descriptor 112: ==557408== ==557408== ==557408== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==557408== ==557408== ==557408== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==557408== ==557408== ==557408== ==557408== HEAP SUMMARY: ==557408== in use at exit: 700,686 bytes in 9,374 blocks ==557408== total heap usage: 3,820,538 allocs, 3,811,164 frees, 1,524,923,145 bytes allocated ==557408== ==557408== LEAK SUMMARY: ==557408== definitely lost: 0 bytes in 0 blocks ==557408== indirectly lost: 0 bytes in 0 blocks ==557408== possibly lost: 0 bytes in 0 blocks ==557408== still reachable: 56 bytes in 3 blocks ==557408== suppressed: 700,630 bytes in 9,371 blocks ==557408== Reachable blocks (those to which a pointer was found) are not shown. ==557408== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==557408== ==557408== For lists of detected and suppressed errors, rerun with: -s ==557408== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)