==557886== Memcheck, a memory error detector ==557886== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==557886== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==557886== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==557886== Parent PID: 541561 ==557886== ==557886== ==557886== FILE DESCRIPTORS: 9 open (3 std) at exit. ==557886== Open file descriptor 12: ==557886== at 0x1190722D: pipe (pipe.c:29) ==557886== by 0x1A6C507D: ??? ==557886== by 0x1582B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==557886== by 0x1120F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557886== by 0x111A8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557886== by 0xFE9FD38: PetscInitialize (pinit.c:924) ==557886== by 0xFD15153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==557886== by 0xFD151A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==557886== by 0x22445D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==557886== by 0x21BE99: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==557886== by 0x21FAA0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==557886== by 0x21F940: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==557886== by 0x21FFD7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==557886== by 0x21A2B5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==557886== ==557886== Open file descriptor 8: /dev/shm/open_mpi.0000 ==557886== at 0x1190BBCC: __open_nocancel (open64_nocancel.c:39) ==557886== by 0x1188FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==557886== by 0xFD49822: ??? ==557886== by 0xFD4996F: ??? ==557886== by 0x158D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==557886== by 0x158D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==557886== by 0x15886922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==557886== by 0x1582B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==557886== by 0x1120F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557886== by 0x111A8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557886== by 0xFE9FD38: PetscInitialize (pinit.c:924) ==557886== by 0xFD15153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==557886== by 0xFD151A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==557886== by 0x22445D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==557886== by 0x21BE99: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==557886== by 0x21FAA0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==557886== by 0x21F940: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==557886== by 0x21FFD7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==557886== by 0x21A2B5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==557886== ==557886== Open file descriptor 116: ==557886== ==557886== ==557886== Open file descriptor 112: ==557886== ==557886== ==557886== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithVertexBasedCellPopulation_valgrind.txt ==557886== ==557886== ==557886== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==557886== ==557886== ==557886== ==557886== HEAP SUMMARY: ==557886== in use at exit: 700,702 bytes in 9,374 blocks ==557886== total heap usage: 3,719,982 allocs, 3,710,608 frees, 1,636,707,240 bytes allocated ==557886== ==557886== LEAK SUMMARY: ==557886== definitely lost: 0 bytes in 0 blocks ==557886== indirectly lost: 0 bytes in 0 blocks ==557886== possibly lost: 0 bytes in 0 blocks ==557886== still reachable: 56 bytes in 3 blocks ==557886== suppressed: 700,646 bytes in 9,371 blocks ==557886== Reachable blocks (those to which a pointer was found) are not shown. ==557886== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==557886== ==557886== For lists of detected and suppressed errors, rerun with: -s ==557886== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)