==543320== Memcheck, a memory error detector ==543320== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==543320== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==543320== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedSrnModels -malloc_debug -malloc_dump -memory_info ==543320== Parent PID: 541561 ==543320== ==543320== ==543320== FILE DESCRIPTORS: 9 open (3 std) at exit. ==543320== Open file descriptor 12: ==543320== at 0xE44922D: pipe (pipe.c:29) ==543320== by 0x18A0407D: ??? ==543320== by 0x12F554CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==543320== by 0xE098418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==543320== by 0xE031D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==543320== by 0xCD28D38: PetscInitialize (pinit.c:924) ==543320== by 0xCB9C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==543320== by 0xCB9C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==543320== by 0x12E3B1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==543320== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==543320== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==543320== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==543320== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==543320== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==543320== ==543320== Open file descriptor 8: /dev/shm/open_mpi.0000 ==543320== at 0xE44DBCC: __open_nocancel (open64_nocancel.c:39) ==543320== by 0xE3D1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==543320== by 0xCBD0822: ??? ==543320== by 0xCBD096F: ??? ==543320== by 0x12FFA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==543320== by 0x12FFA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==543320== by 0x12FB0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==543320== by 0x12F552DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==543320== by 0xE098418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==543320== by 0xE031D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==543320== by 0xCD28D38: PetscInitialize (pinit.c:924) ==543320== by 0xCB9C153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==543320== by 0xCB9C1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==543320== by 0x12E3B1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==543320== by 0x1272FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==543320== by 0x129E8A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==543320== by 0x129D2A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==543320== by 0x12A3C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==543320== by 0x125725: main (TestOdeBasedSrnModels.cpp:19) ==543320== ==543320== Open file descriptor 116: ==543320== ==543320== ==543320== Open file descriptor 112: ==543320== ==543320== ==543320== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedSrnModels_valgrind.txt ==543320== ==543320== ==543320== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==543320== ==543320== ==543320== ==543320== HEAP SUMMARY: ==543320== in use at exit: 700,770 bytes in 9,379 blocks ==543320== total heap usage: 58,976 allocs, 49,597 frees, 1,354,500,065 bytes allocated ==543320== ==543320== LEAK SUMMARY: ==543320== definitely lost: 0 bytes in 0 blocks ==543320== indirectly lost: 0 bytes in 0 blocks ==543320== possibly lost: 0 bytes in 0 blocks ==543320== still reachable: 72 bytes in 4 blocks ==543320== suppressed: 700,698 bytes in 9,375 blocks ==543320== Reachable blocks (those to which a pointer was found) are not shown. ==543320== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==543320== ==543320== For lists of detected and suppressed errors, rerun with: -s ==543320== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)