==557847== Memcheck, a memory error detector ==557847== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==557847== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==557847== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexBasedCellPopulationForCrypt -malloc_debug -malloc_dump -memory_info ==557847== Parent PID: 541561 ==557847== ==557847== ==557847== FILE DESCRIPTORS: 9 open (3 std) at exit. ==557847== Open file descriptor 12: ==557847== at 0x118C522D: pipe (pipe.c:29) ==557847== by 0x1A6C507D: ??? ==557847== by 0x1582B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==557847== by 0x111CD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557847== by 0x11166D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557847== by 0xFE3DD38: PetscInitialize (pinit.c:924) ==557847== by 0xFD15153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==557847== by 0xFD151A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==557847== by 0x11D953: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==557847== by 0x119133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==557847== by 0x11B52C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==557847== by 0x11B427: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==557847== by 0x11BA3B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==557847== by 0x117935: main (TestVertexBasedCellPopulationForCrypt.cpp:18) ==557847== ==557847== Open file descriptor 8: /dev/shm/open_mpi.0000 ==557847== at 0x118C9BCC: __open_nocancel (open64_nocancel.c:39) ==557847== by 0x1184DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==557847== by 0x110C7822: ??? ==557847== by 0x110C796F: ??? ==557847== by 0x158D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==557847== by 0x158D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==557847== by 0x15886922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==557847== by 0x1582B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==557847== by 0x111CD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557847== by 0x11166D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557847== by 0xFE3DD38: PetscInitialize (pinit.c:924) ==557847== by 0xFD15153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==557847== by 0xFD151A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==557847== by 0x11D953: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==557847== by 0x119133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==557847== by 0x11B52C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==557847== by 0x11B427: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==557847== by 0x11BA3B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==557847== by 0x117935: main (TestVertexBasedCellPopulationForCrypt.cpp:18) ==557847== ==557847== Open file descriptor 116: ==557847== ==557847== ==557847== Open file descriptor 112: ==557847== ==557847== ==557847== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexBasedCellPopulationForCrypt_valgrind.txt ==557847== ==557847== ==557847== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==557847== ==557847== ==557847== ==557847== HEAP SUMMARY: ==557847== in use at exit: 700,850 bytes in 9,379 blocks ==557847== total heap usage: 55,644 allocs, 46,265 frees, 1,353,989,519 bytes allocated ==557847== ==557847== LEAK SUMMARY: ==557847== definitely lost: 0 bytes in 0 blocks ==557847== indirectly lost: 0 bytes in 0 blocks ==557847== possibly lost: 0 bytes in 0 blocks ==557847== still reachable: 136 bytes in 4 blocks ==557847== suppressed: 700,714 bytes in 9,375 blocks ==557847== Reachable blocks (those to which a pointer was found) are not shown. ==557847== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==557847== ==557847== For lists of detected and suppressed errors, rerun with: -s ==557847== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)