==636561== Memcheck, a memory error detector ==636561== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==636561== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==636561== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem -malloc_debug -malloc_dump -memory_info ==636561== Parent PID: 619305 ==636561== ==636561== ==636561== FILE DESCRIPTORS: 9 open (3 std) at exit. ==636561== Open file descriptor 12: ==636561== at 0x856A22D: pipe (pipe.c:29) ==636561== by 0x13F8207D: ??? ==636561== by 0xEA7A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==636561== by 0x9C64418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==636561== by 0x9BFDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==636561== by 0x88F4D38: PetscInitialize (pinit.c:924) ==636561== by 0x819A153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==636561== by 0x819A1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==636561== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==636561== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==636561== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==636561== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==636561== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==636561== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==636561== ==636561== Open file descriptor 8: /dev/shm/open_mpi.0000 ==636561== at 0x856EBCC: __open_nocancel (open64_nocancel.c:39) ==636561== by 0x84F2C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==636561== by 0x81CE822: ??? ==636561== by 0x81CE96F: ??? ==636561== by 0xEB1F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==636561== by 0xEB1F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==636561== by 0xEAD5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==636561== by 0xEA7A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==636561== by 0x9C64418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==636561== by 0x9BFDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==636561== by 0x88F4D38: PetscInitialize (pinit.c:924) ==636561== by 0x819A153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==636561== by 0x819A1A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==636561== by 0x1151B2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==636561== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==636561== by 0x112FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==636561== by 0x112EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==636561== by 0x1134D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==636561== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==636561== ==636561== Open file descriptor 116: ==636561== ==636561== ==636561== Open file descriptor 112: ==636561== ==636561== ==636561== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem_valgrind.txt ==636561== ==636561== ==636561== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==636561== ==636561== ==636561== ==636561== HEAP SUMMARY: ==636561== in use at exit: 700,738 bytes in 9,377 blocks ==636561== total heap usage: 51,124 allocs, 41,747 frees, 1,353,596,082 bytes allocated ==636561== ==636561== LEAK SUMMARY: ==636561== definitely lost: 0 bytes in 0 blocks ==636561== indirectly lost: 0 bytes in 0 blocks ==636561== possibly lost: 0 bytes in 0 blocks ==636561== still reachable: 24 bytes in 2 blocks ==636561== suppressed: 700,714 bytes in 9,375 blocks ==636561== Reachable blocks (those to which a pointer was found) are not shown. ==636561== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==636561== ==636561== For lists of detected and suppressed errors, rerun with: -s ==636561== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)