==621327== Memcheck, a memory error detector ==621327== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==621327== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==621327== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation3d -malloc_debug -malloc_dump -memory_info ==621327== Parent PID: 619305 ==621327== ==621327== ==621327== FILE DESCRIPTORS: 9 open (3 std) at exit. ==621327== Open file descriptor 12: ==621327== at 0x1012E22D: pipe (pipe.c:29) ==621327== by 0x18A0507D: ??? ==621327== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==621327== by 0xF94F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==621327== by 0xF8E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==621327== by 0xE5DFD38: PetscInitialize (pinit.c:924) ==621327== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==621327== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==621327== by 0x1FF4E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==621327== by 0x1F945F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==621327== by 0x1FC774: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==621327== by 0x1FC670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==621327== by 0x1FCC83: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==621327== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==621327== ==621327== Open file descriptor 8: /dev/shm/open_mpi.0000 ==621327== at 0x10132BCC: __open_nocancel (open64_nocancel.c:39) ==621327== by 0x100B6C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==621327== by 0xE489822: ??? ==621327== by 0xE48996F: ??? ==621327== by 0x1400F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==621327== by 0x1400F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==621327== by 0x13FC5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==621327== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==621327== by 0xF94F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==621327== by 0xF8E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==621327== by 0xE5DFD38: PetscInitialize (pinit.c:924) ==621327== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==621327== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==621327== by 0x1FF4E9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==621327== by 0x1F945F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==621327== by 0x1FC774: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==621327== by 0x1FC670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==621327== by 0x1FCC83: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==621327== by 0x1F7C55: main (TestOffLatticeSimulation3d.cpp:18) ==621327== ==621327== Open file descriptor 116: ==621327== ==621327== ==621327== Open file descriptor 112: ==621327== ==621327== ==621327== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation3d_valgrind.txt ==621327== ==621327== ==621327== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==621327== ==621327== ==621327== ==621327== HEAP SUMMARY: ==621327== in use at exit: 700,754 bytes in 9,378 blocks ==621327== total heap usage: 856,548 allocs, 847,170 frees, 1,519,121,307 bytes allocated ==621327== ==621327== LEAK SUMMARY: ==621327== definitely lost: 0 bytes in 0 blocks ==621327== indirectly lost: 0 bytes in 0 blocks ==621327== possibly lost: 0 bytes in 0 blocks ==621327== still reachable: 56 bytes in 3 blocks ==621327== suppressed: 700,698 bytes in 9,375 blocks ==621327== Reachable blocks (those to which a pointer was found) are not shown. ==621327== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==621327== ==621327== For lists of detected and suppressed errors, rerun with: -s ==621327== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)