==621587== Memcheck, a memory error detector ==621587== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==621587== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==621587== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==621587== Parent PID: 619305 ==621587== ==621587== ==621587== FILE DESCRIPTORS: 9 open (3 std) at exit. ==621587== Open file descriptor 12: ==621587== at 0xF01622D: pipe (pipe.c:29) ==621587== by 0x18A0407D: ??? ==621587== by 0x140074CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==621587== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==621587== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==621587== by 0xF565D38: PetscInitialize (pinit.c:924) ==621587== by 0xE7F2153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==621587== by 0xE7F21A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==621587== by 0x22552E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==621587== by 0x21EBB1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==621587== by 0x22271C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==621587== by 0x2225BC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==621587== by 0x222C53: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==621587== by 0x21CF95: main (TestOffLatticeSimulationWithPdes.cpp:19) ==621587== ==621587== Open file descriptor 8: /dev/shm/open_mpi.0000 ==621587== at 0xF01ABCC: __open_nocancel (open64_nocancel.c:39) ==621587== by 0xEF9EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==621587== by 0xE826822: ??? ==621587== by 0xE82696F: ??? ==621587== by 0x140AC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==621587== by 0x140AC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==621587== by 0x14062922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==621587== by 0x140072DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==621587== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==621587== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==621587== by 0xF565D38: PetscInitialize (pinit.c:924) ==621587== by 0xE7F2153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==621587== by 0xE7F21A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==621587== by 0x22552E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==621587== by 0x21EBB1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==621587== by 0x22271C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==621587== by 0x2225BC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==621587== by 0x222C53: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==621587== by 0x21CF95: main (TestOffLatticeSimulationWithPdes.cpp:19) ==621587== ==621587== Open file descriptor 116: ==621587== ==621587== ==621587== Open file descriptor 112: ==621587== ==621587== ==621587== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==621587== ==621587== ==621587== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==621587== ==621587== ==621587== ==621587== HEAP SUMMARY: ==621587== in use at exit: 700,686 bytes in 9,374 blocks ==621587== total heap usage: 7,488,359 allocs, 7,478,985 frees, 2,658,241,132 bytes allocated ==621587== ==621587== LEAK SUMMARY: ==621587== definitely lost: 0 bytes in 0 blocks ==621587== indirectly lost: 0 bytes in 0 blocks ==621587== possibly lost: 0 bytes in 0 blocks ==621587== still reachable: 56 bytes in 3 blocks ==621587== suppressed: 700,630 bytes in 9,371 blocks ==621587== Reachable blocks (those to which a pointer was found) are not shown. ==621587== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==621587== ==621587== For lists of detected and suppressed errors, rerun with: -s ==621587== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)