==621649== Memcheck, a memory error detector ==621649== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==621649== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==621649== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==621649== Parent PID: 619305 ==621649== ==621649== ==621649== FILE DESCRIPTORS: 9 open (3 std) at exit. ==621649== Open file descriptor 12: ==621649== at 0x1012E22D: pipe (pipe.c:29) ==621649== by 0x18A0507D: ??? ==621649== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==621649== by 0xF94F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==621649== by 0xF8E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==621649== by 0xE5DFD38: PetscInitialize (pinit.c:924) ==621649== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==621649== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==621649== by 0x1FFF0B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==621649== by 0x1F9AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==621649== by 0x1FD444: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==621649== by 0x1FD2E4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==621649== by 0x1FD97B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==621649== by 0x1F7EF5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==621649== ==621649== Open file descriptor 8: /dev/shm/open_mpi.0000 ==621649== at 0x10132BCC: __open_nocancel (open64_nocancel.c:39) ==621649== by 0x100B6C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==621649== by 0xE489822: ??? ==621649== by 0xE48996F: ??? ==621649== by 0x1400F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==621649== by 0x1400F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==621649== by 0x13FC5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==621649== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==621649== by 0xF94F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==621649== by 0xF8E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==621649== by 0xE5DFD38: PetscInitialize (pinit.c:924) ==621649== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==621649== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==621649== by 0x1FFF0B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==621649== by 0x1F9AD9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==621649== by 0x1FD444: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==621649== by 0x1FD2E4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==621649== by 0x1FD97B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==621649== by 0x1F7EF5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==621649== ==621649== Open file descriptor 116: ==621649== ==621649== ==621649== Open file descriptor 112: ==621649== ==621649== ==621649== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==621649== ==621649== ==621649== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==621649== ==621649== ==621649== ==621649== HEAP SUMMARY: ==621649== in use at exit: 700,686 bytes in 9,374 blocks ==621649== total heap usage: 9,749,296 allocs, 9,739,922 frees, 2,617,598,428 bytes allocated ==621649== ==621649== LEAK SUMMARY: ==621649== definitely lost: 0 bytes in 0 blocks ==621649== indirectly lost: 0 bytes in 0 blocks ==621649== possibly lost: 0 bytes in 0 blocks ==621649== still reachable: 56 bytes in 3 blocks ==621649== suppressed: 700,630 bytes in 9,371 blocks ==621649== Reachable blocks (those to which a pointer was found) are not shown. ==621649== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==621649== ==621649== For lists of detected and suppressed errors, rerun with: -s ==621649== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)