==634861== Memcheck, a memory error detector ==634861== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==634861== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==634861== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningVertexBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==634861== Parent PID: 619305 ==634861== ==634861== ==634861== FILE DESCRIPTORS: 9 open (3 std) at exit. ==634861== Open file descriptor 12: ==634861== at 0x100EC22D: pipe (pipe.c:29) ==634861== by 0x18A0507D: ??? ==634861== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==634861== by 0xF90D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==634861== by 0xF8A6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==634861== by 0xE57DD38: PetscInitialize (pinit.c:924) ==634861== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==634861== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==634861== by 0x1298C5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==634861== by 0x124A6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==634861== by 0x1270EA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==634861== by 0x126F8A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==634861== by 0x127621: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==634861== by 0x122E95: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==634861== ==634861== Open file descriptor 8: /dev/shm/open_mpi.0000 ==634861== at 0x100F0BCC: __open_nocancel (open64_nocancel.c:39) ==634861== by 0x10074C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==634861== by 0xF807822: ??? ==634861== by 0xF80796F: ??? ==634861== by 0x1400D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==634861== by 0x1400D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==634861== by 0x13FC3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==634861== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==634861== by 0xF90D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==634861== by 0xF8A6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==634861== by 0xE57DD38: PetscInitialize (pinit.c:924) ==634861== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==634861== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==634861== by 0x1298C5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==634861== by 0x124A6D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==634861== by 0x1270EA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==634861== by 0x126F8A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==634861== by 0x127621: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==634861== by 0x122E95: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==634861== ==634861== Open file descriptor 116: ==634861== ==634861== ==634861== Open file descriptor 112: ==634861== ==634861== ==634861== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedSimulationsTutorial_valgrind.txt ==634861== ==634861== ==634861== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==634861== ==634861== ==634861== ==634861== HEAP SUMMARY: ==634861== in use at exit: 700,754 bytes in 9,378 blocks ==634861== total heap usage: 1,401,118 allocs, 1,391,740 frees, 1,413,576,022 bytes allocated ==634861== ==634861== LEAK SUMMARY: ==634861== definitely lost: 0 bytes in 0 blocks ==634861== indirectly lost: 0 bytes in 0 blocks ==634861== possibly lost: 0 bytes in 0 blocks ==634861== still reachable: 56 bytes in 3 blocks ==634861== suppressed: 700,698 bytes in 9,375 blocks ==634861== Reachable blocks (those to which a pointer was found) are not shown. ==634861== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==634861== ==634861== For lists of detected and suppressed errors, rerun with: -s ==634861== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)