==697409== Memcheck, a memory error detector ==697409== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==697409== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==697409== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCheckpointing -malloc_debug -malloc_dump -memory_info ==697409== Parent PID: 679151 ==697409== ==697409== ==697409== FILE DESCRIPTORS: 9 open (3 std) at exit. ==697409== Open file descriptor 12: ==697409== at 0xA41E22D: pipe (pipe.c:29) ==697409== by 0x13F8107D: ??? ==697409== by 0xF78D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==697409== by 0xBB16418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==697409== by 0xBAAFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==697409== by 0xA7A6D38: PetscInitialize (pinit.c:924) ==697409== by 0x9D09153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==697409== by 0x9D091A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==697409== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==697409== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==697409== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==697409== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==697409== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==697409== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==697409== ==697409== Open file descriptor 8: /dev/shm/open_mpi.0000 ==697409== at 0xA422BCC: __open_nocancel (open64_nocancel.c:39) ==697409== by 0xA3A6C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==697409== by 0x9D3D822: ??? ==697409== by 0x9D3D96F: ??? ==697409== by 0xF8326DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==697409== by 0xF832938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==697409== by 0xF7E8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==697409== by 0xF78D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==697409== by 0xBB16418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==697409== by 0xBAAFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==697409== by 0xA7A6D38: PetscInitialize (pinit.c:924) ==697409== by 0x9D09153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==697409== by 0x9D091A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==697409== by 0x1239FA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==697409== by 0x11E4F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==697409== by 0x120D74: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==697409== by 0x120C6F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==697409== by 0x121283: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==697409== by 0x11CCF5: main (TestCheckpointing.cpp:18) ==697409== ==697409== Open file descriptor 116: ==697409== ==697409== ==697409== Open file descriptor 112: ==697409== ==697409== ==697409== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCheckpointing_valgrind.txt ==697409== ==697409== ==697409== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==697409== ==697409== ==697409== ==697409== HEAP SUMMARY: ==697409== in use at exit: 701,218 bytes in 9,387 blocks ==697409== total heap usage: 837,335 allocs, 827,948 frees, 1,458,877,114 bytes allocated ==697409== ==697409== LEAK SUMMARY: ==697409== definitely lost: 0 bytes in 0 blocks ==697409== indirectly lost: 0 bytes in 0 blocks ==697409== possibly lost: 0 bytes in 0 blocks ==697409== still reachable: 24 bytes in 2 blocks ==697409== suppressed: 701,194 bytes in 9,385 blocks ==697409== Reachable blocks (those to which a pointer was found) are not shown. ==697409== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==697409== ==697409== For lists of detected and suppressed errors, rerun with: -s ==697409== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 64 from 38)