==680838== Memcheck, a memory error detector ==680838== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==680838== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==680838== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulationWithGhostNodes -malloc_debug -malloc_dump -memory_info ==680838== Parent PID: 679151 ==680838== ==680838== ==680838== FILE DESCRIPTORS: 9 open (3 std) at exit. ==680838== Open file descriptor 12: ==680838== at 0x100EC22D: pipe (pipe.c:29) ==680838== by 0x18A0507D: ??? ==680838== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==680838== by 0xF90D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==680838== by 0xF8A6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==680838== by 0xE57DD38: PetscInitialize (pinit.c:924) ==680838== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==680838== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==680838== by 0x159CC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==680838== by 0x1521ED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==680838== by 0x15569A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==680838== by 0x15553A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==680838== by 0x155BD1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==680838== by 0x150615: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==680838== ==680838== Open file descriptor 8: /dev/shm/open_mpi.0000 ==680838== at 0x100F0BCC: __open_nocancel (open64_nocancel.c:39) ==680838== by 0x10074C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==680838== by 0xF807822: ??? ==680838== by 0xF80796F: ??? ==680838== by 0x1400D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==680838== by 0x1400D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==680838== by 0x13FC3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==680838== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==680838== by 0xF90D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==680838== by 0xF8A6D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==680838== by 0xE57DD38: PetscInitialize (pinit.c:924) ==680838== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==680838== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==680838== by 0x159CC5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==680838== by 0x1521ED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==680838== by 0x15569A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==680838== by 0x15553A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==680838== by 0x155BD1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==680838== by 0x150615: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==680838== ==680838== Open file descriptor 116: ==680838== ==680838== ==680838== Open file descriptor 112: ==680838== ==680838== ==680838== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulationWithGhostNodes_valgrind.txt ==680838== ==680838== ==680838== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==680838== ==680838== ==680838== ==680838== HEAP SUMMARY: ==680838== in use at exit: 700,754 bytes in 9,378 blocks ==680838== total heap usage: 223,431 allocs, 214,053 frees, 1,378,723,065 bytes allocated ==680838== ==680838== LEAK SUMMARY: ==680838== definitely lost: 0 bytes in 0 blocks ==680838== indirectly lost: 0 bytes in 0 blocks ==680838== possibly lost: 0 bytes in 0 blocks ==680838== still reachable: 56 bytes in 3 blocks ==680838== suppressed: 700,698 bytes in 9,375 blocks ==680838== Reachable blocks (those to which a pointer was found) are not shown. ==680838== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==680838== ==680838== For lists of detected and suppressed errors, rerun with: -s ==680838== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)