==680887== Memcheck, a memory error detector ==680887== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==680887== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==680887== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithParticles -malloc_debug -malloc_dump -memory_info ==680887== Parent PID: 679151 ==680887== ==680887== ==680887== FILE DESCRIPTORS: 9 open (3 std) at exit. ==680887== Open file descriptor 12: ==680887== at 0xEC7922D: pipe (pipe.c:29) ==680887== by 0x18A0507D: ??? ==680887== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==680887== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==680887== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==680887== by 0xF565D38: PetscInitialize (pinit.c:924) ==680887== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==680887== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==680887== by 0x2E2C1A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==680887== by 0x2D9439: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==680887== by 0x2DDE04: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==680887== by 0x2DDCA4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==680887== by 0x2DE33B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==680887== by 0x2D7855: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==680887== ==680887== Open file descriptor 8: /dev/shm/open_mpi.0000 ==680887== at 0xEC7DBCC: __open_nocancel (open64_nocancel.c:39) ==680887== by 0xEC01C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==680887== by 0xE489822: ??? ==680887== by 0xE48996F: ??? ==680887== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==680887== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==680887== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==680887== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==680887== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==680887== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==680887== by 0xF565D38: PetscInitialize (pinit.c:924) ==680887== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==680887== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==680887== by 0x2E2C1A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==680887== by 0x2D9439: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==680887== by 0x2DDE04: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==680887== by 0x2DDCA4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==680887== by 0x2DE33B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==680887== by 0x2D7855: main (TestNodeBasedCellPopulationWithParticles.cpp:19) ==680887== ==680887== Open file descriptor 116: ==680887== ==680887== ==680887== Open file descriptor 112: ==680887== ==680887== ==680887== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithParticles_valgrind.txt ==680887== ==680887== ==680887== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==680887== ==680887== ==680887== ==680887== HEAP SUMMARY: ==680887== in use at exit: 700,754 bytes in 9,378 blocks ==680887== total heap usage: 105,339 allocs, 95,961 frees, 1,361,241,341 bytes allocated ==680887== ==680887== LEAK SUMMARY: ==680887== definitely lost: 0 bytes in 0 blocks ==680887== indirectly lost: 0 bytes in 0 blocks ==680887== possibly lost: 0 bytes in 0 blocks ==680887== still reachable: 56 bytes in 3 blocks ==680887== suppressed: 700,698 bytes in 9,375 blocks ==680887== Reachable blocks (those to which a pointer was found) are not shown. ==680887== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==680887== ==680887== For lists of detected and suppressed errors, rerun with: -s ==680887== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)