==680846== Memcheck, a memory error detector ==680846== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==680846== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==680846== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==680846== Parent PID: 679151 ==680846== ==680846== ==680846== FILE DESCRIPTORS: 9 open (3 std) at exit. ==680846== Open file descriptor 12: ==680846== at 0xEC2122D: pipe (pipe.c:29) ==680846== by 0x18A0507D: ??? ==680846== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==680846== by 0x107EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==680846== by 0x10787D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==680846== by 0xF47CD38: PetscInitialize (pinit.c:924) ==680846== by 0xE4E4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==680846== by 0xE4E41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==680846== by 0x2E2582: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==680846== by 0x2D9079: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==680846== by 0x2DD8D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==680846== by 0x2DD776: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==680846== by 0x2DDE0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==680846== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==680846== ==680846== Open file descriptor 8: /dev/shm/open_mpi.0000 ==680846== at 0xEC25BCC: __open_nocancel (open64_nocancel.c:39) ==680846== by 0xEBA9C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==680846== by 0xE518822: ??? ==680846== by 0xE51896F: ??? ==680846== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==680846== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==680846== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==680846== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==680846== by 0x107EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==680846== by 0x10787D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==680846== by 0xF47CD38: PetscInitialize (pinit.c:924) ==680846== by 0xE4E4153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==680846== by 0xE4E41A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==680846== by 0x2E2582: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==680846== by 0x2D9079: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==680846== by 0x2DD8D6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==680846== by 0x2DD776: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==680846== by 0x2DDE0D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==680846== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==680846== ==680846== Open file descriptor 116: ==680846== ==680846== ==680846== Open file descriptor 112: ==680846== ==680846== ==680846== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==680846== ==680846== ==680846== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==680846== ==680846== ==680846== ==680846== HEAP SUMMARY: ==680846== in use at exit: 700,686 bytes in 9,374 blocks ==680846== total heap usage: 20,194,374 allocs, 20,185,000 frees, 2,578,015,478 bytes allocated ==680846== ==680846== LEAK SUMMARY: ==680846== definitely lost: 0 bytes in 0 blocks ==680846== indirectly lost: 0 bytes in 0 blocks ==680846== possibly lost: 0 bytes in 0 blocks ==680846== still reachable: 56 bytes in 3 blocks ==680846== suppressed: 700,630 bytes in 9,371 blocks ==680846== Reachable blocks (those to which a pointer was found) are not shown. ==680846== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==680846== ==680846== For lists of detected and suppressed errors, rerun with: -s ==680846== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)