==681314== Memcheck, a memory error detector ==681314== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==681314== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==681314== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==681314== Parent PID: 679151 ==681314== ==681314== ==681314== FILE DESCRIPTORS: 9 open (3 std) at exit. ==681314== Open file descriptor 12: ==681314== at 0xEC7922D: pipe (pipe.c:29) ==681314== by 0x18A0507D: ??? ==681314== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==681314== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==681314== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==681314== by 0xF565D38: PetscInitialize (pinit.c:924) ==681314== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==681314== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==681314== by 0x21262C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==681314== by 0x209E39: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==681314== by 0x20DA88: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==681314== by 0x20D928: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==681314== by 0x20DFBF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==681314== by 0x208255: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==681314== ==681314== Open file descriptor 8: /dev/shm/open_mpi.0000 ==681314== at 0xEC7DBCC: __open_nocancel (open64_nocancel.c:39) ==681314== by 0xEC01C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==681314== by 0xE489822: ??? ==681314== by 0xE48996F: ??? ==681314== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==681314== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==681314== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==681314== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==681314== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==681314== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==681314== by 0xF565D38: PetscInitialize (pinit.c:924) ==681314== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==681314== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==681314== by 0x21262C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==681314== by 0x209E39: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==681314== by 0x20DA88: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==681314== by 0x20D928: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==681314== by 0x20DFBF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==681314== by 0x208255: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==681314== ==681314== Open file descriptor 116: ==681314== ==681314== ==681314== Open file descriptor 112: ==681314== ==681314== ==681314== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==681314== ==681314== ==681314== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==681314== ==681314== ==681314== ==681314== HEAP SUMMARY: ==681314== in use at exit: 700,718 bytes in 9,375 blocks ==681314== total heap usage: 17,974,451 allocs, 17,965,076 frees, 30,089,545,533 bytes allocated ==681314== ==681314== LEAK SUMMARY: ==681314== definitely lost: 0 bytes in 0 blocks ==681314== indirectly lost: 0 bytes in 0 blocks ==681314== possibly lost: 0 bytes in 0 blocks ==681314== still reachable: 88 bytes in 4 blocks ==681314== suppressed: 700,630 bytes in 9,371 blocks ==681314== Reachable blocks (those to which a pointer was found) are not shown. ==681314== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==681314== ==681314== For lists of detected and suppressed errors, rerun with: -s ==681314== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)