==681673== Memcheck, a memory error detector ==681673== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==681673== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==681673== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==681673== Parent PID: 679151 ==681673== ==681673== ==681673== FILE DESCRIPTORS: 9 open (3 std) at exit. ==681673== Open file descriptor 12: ==681673== at 0xF0F522D: pipe (pipe.c:29) ==681673== by 0x18A0407D: ??? ==681673== by 0x1412B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==681673== by 0x10D51418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==681673== by 0x10CEAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==681673== by 0xF9E1D38: PetscInitialize (pinit.c:924) ==681673== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==681673== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==681673== by 0x1D2482: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==681673== by 0x1CBE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==681673== by 0x1CF5B4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==681673== by 0x1CF454: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==681673== by 0x1CFAEB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==681673== by 0x1CA235: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==681673== ==681673== Open file descriptor 8: /dev/shm/open_mpi.0000 ==681673== at 0xF0F9BCC: __open_nocancel (open64_nocancel.c:39) ==681673== by 0xF07DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==681673== by 0xE489822: ??? ==681673== by 0xE48996F: ??? ==681673== by 0x141D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==681673== by 0x141D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==681673== by 0x14186922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==681673== by 0x1412B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==681673== by 0x10D51418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==681673== by 0x10CEAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==681673== by 0xF9E1D38: PetscInitialize (pinit.c:924) ==681673== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==681673== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==681673== by 0x1D2482: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==681673== by 0x1CBE19: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==681673== by 0x1CF5B4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==681673== by 0x1CF454: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==681673== by 0x1CFAEB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==681673== by 0x1CA235: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==681673== ==681673== Open file descriptor 116: ==681673== ==681673== ==681673== Open file descriptor 112: ==681673== ==681673== ==681673== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==681673== ==681673== ==681673== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==681673== ==681673== ==681673== ==681673== HEAP SUMMARY: ==681673== in use at exit: 700,686 bytes in 9,374 blocks ==681673== total heap usage: 7,097,342 allocs, 7,087,968 frees, 8,099,000,883 bytes allocated ==681673== ==681673== LEAK SUMMARY: ==681673== definitely lost: 0 bytes in 0 blocks ==681673== indirectly lost: 0 bytes in 0 blocks ==681673== possibly lost: 0 bytes in 0 blocks ==681673== still reachable: 56 bytes in 3 blocks ==681673== suppressed: 700,630 bytes in 9,371 blocks ==681673== Reachable blocks (those to which a pointer was found) are not shown. ==681673== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==681673== ==681673== For lists of detected and suppressed errors, rerun with: -s ==681673== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)