==741387== Memcheck, a memory error detector ==741387== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==741387== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==741387== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithEllipticBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==741387== Parent PID: 739035 ==741387== ==741387== ==741387== FILE DESCRIPTORS: 9 open (3 std) at exit. ==741387== Open file descriptor 12: ==741387== at 0x103A222D: pipe (pipe.c:29) ==741387== by 0x18A0407D: ??? ==741387== by 0x13F674CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==741387== by 0xFCAA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==741387== by 0xFC43D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==741387== by 0xE91AD38: PetscInitialize (pinit.c:924) ==741387== by 0xE7F2153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==741387== by 0xE7F21A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==741387== by 0x1284B9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==741387== by 0x123A33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==741387== by 0x125FAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==741387== by 0x125EA5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==741387== by 0x1264B9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==741387== by 0x122235: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==741387== ==741387== Open file descriptor 8: /dev/shm/open_mpi.0000 ==741387== at 0x103A6BCC: __open_nocancel (open64_nocancel.c:39) ==741387== by 0x1032AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==741387== by 0xFBA4822: ??? ==741387== by 0xFBA496F: ??? ==741387== by 0x1400C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==741387== by 0x1400C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==741387== by 0x13FC2922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==741387== by 0x13F672DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==741387== by 0xFCAA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==741387== by 0xFC43D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==741387== by 0xE91AD38: PetscInitialize (pinit.c:924) ==741387== by 0xE7F2153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==741387== by 0xE7F21A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==741387== by 0x1284B9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==741387== by 0x123A33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==741387== by 0x125FAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==741387== by 0x125EA5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==741387== by 0x1264B9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==741387== by 0x122235: main (TestSimulationsWithEllipticBoxDomainPdeModifier.cpp:18) ==741387== ==741387== Open file descriptor 116: ==741387== ==741387== ==741387== Open file descriptor 112: ==741387== ==741387== ==741387== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithEllipticBoxDomainPdeModifier_valgrind.txt ==741387== ==741387== ==741387== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==741387== ==741387== ==741387== ==741387== HEAP SUMMARY: ==741387== in use at exit: 700,686 bytes in 9,374 blocks ==741387== total heap usage: 7,732,913 allocs, 7,723,539 frees, 2,197,578,131 bytes allocated ==741387== ==741387== LEAK SUMMARY: ==741387== definitely lost: 0 bytes in 0 blocks ==741387== indirectly lost: 0 bytes in 0 blocks ==741387== possibly lost: 0 bytes in 0 blocks ==741387== still reachable: 56 bytes in 3 blocks ==741387== suppressed: 700,630 bytes in 9,371 blocks ==741387== Reachable blocks (those to which a pointer was found) are not shown. ==741387== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==741387== ==741387== For lists of detected and suppressed errors, rerun with: -s ==741387== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)