==884505== Memcheck, a memory error detector ==884505== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==884505== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==884505== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==884505== Parent PID: 868717 ==884505== ==884505== ==884505== FILE DESCRIPTORS: 9 open (3 std) at exit. ==884505== Open file descriptor 12: ==884505== at 0x1053922D: pipe (pipe.c:29) ==884505== by 0x1A6C807D: ??? ==884505== by 0x158C84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==884505== by 0x12195418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==884505== by 0x1212ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==884505== by 0x10E25D38: PetscInitialize (pinit.c:924) ==884505== by 0xFD15153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==884505== by 0xFD151A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==884505== by 0x23B384: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==884505== by 0x231879: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==884505== by 0x235FAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==884505== by 0x235E4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==884505== by 0x2364E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==884505== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==884505== ==884505== Open file descriptor 8: /dev/shm/open_mpi.0000 ==884505== at 0x1053DBCC: __open_nocancel (open64_nocancel.c:39) ==884505== by 0x104C1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==884505== by 0xFD49822: ??? ==884505== by 0xFD4996F: ??? ==884505== by 0x1596D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==884505== by 0x1596D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==884505== by 0x15923922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==884505== by 0x158C82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==884505== by 0x12195418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==884505== by 0x1212ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==884505== by 0x10E25D38: PetscInitialize (pinit.c:924) ==884505== by 0xFD15153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==884505== by 0xFD151A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==884505== by 0x23B384: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==884505== by 0x231879: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==884505== by 0x235FAA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==884505== by 0x235E4A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==884505== by 0x2364E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==884505== by 0x22FC95: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==884505== ==884505== Open file descriptor 116: ==884505== ==884505== ==884505== Open file descriptor 112: ==884505== ==884505== ==884505== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==884505== ==884505== ==884505== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==884505== ==884505== ==884505== ==884505== HEAP SUMMARY: ==884505== in use at exit: 700,702 bytes in 9,374 blocks ==884505== total heap usage: 6,309,653 allocs, 6,300,279 frees, 2,072,713,231 bytes allocated ==884505== ==884505== LEAK SUMMARY: ==884505== definitely lost: 0 bytes in 0 blocks ==884505== indirectly lost: 0 bytes in 0 blocks ==884505== possibly lost: 0 bytes in 0 blocks ==884505== still reachable: 56 bytes in 3 blocks ==884505== suppressed: 700,646 bytes in 9,371 blocks ==884505== Reachable blocks (those to which a pointer was found) are not shown. ==884505== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==884505== ==884505== For lists of detected and suppressed errors, rerun with: -s ==884505== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)