==870441== Memcheck, a memory error detector ==870441== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==870441== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==870441== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithBuskeUpdate -malloc_debug -malloc_dump -memory_info ==870441== Parent PID: 868717 ==870441== ==870441== ==870441== FILE DESCRIPTORS: 9 open (3 std) at exit. ==870441== Open file descriptor 12: ==870441== at 0xEB9022D: pipe (pipe.c:29) ==870441== by 0x18A0507D: ??? ==870441== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==870441== by 0x107EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==870441== by 0x10787D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==870441== by 0xF47CD38: PetscInitialize (pinit.c:924) ==870441== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==870441== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==870441== by 0x2CC5B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==870441== by 0x2C3A9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==870441== by 0x2C7EB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==870441== by 0x2C7DB3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==870441== by 0x2C83C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==870441== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==870441== ==870441== Open file descriptor 8: /dev/shm/open_mpi.0000 ==870441== at 0xEB94BCC: __open_nocancel (open64_nocancel.c:39) ==870441== by 0xEB18C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==870441== by 0xE489822: ??? ==870441== by 0xE48996F: ??? ==870441== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==870441== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==870441== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==870441== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==870441== by 0x107EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==870441== by 0x10787D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==870441== by 0xF47CD38: PetscInitialize (pinit.c:924) ==870441== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==870441== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==870441== by 0x2CC5B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==870441== by 0x2C3A9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==870441== by 0x2C7EB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==870441== by 0x2C7DB3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==870441== by 0x2C83C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==870441== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==870441== ==870441== Open file descriptor 116: ==870441== ==870441== ==870441== Open file descriptor 112: ==870441== ==870441== ==870441== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithBuskeUpdate_valgrind.txt ==870441== ==870441== ==870441== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==870441== ==870441== ==870441== ==870441== HEAP SUMMARY: ==870441== in use at exit: 700,754 bytes in 9,378 blocks ==870441== total heap usage: 58,740 allocs, 49,362 frees, 1,355,241,166 bytes allocated ==870441== ==870441== LEAK SUMMARY: ==870441== definitely lost: 0 bytes in 0 blocks ==870441== indirectly lost: 0 bytes in 0 blocks ==870441== possibly lost: 0 bytes in 0 blocks ==870441== still reachable: 56 bytes in 3 blocks ==870441== suppressed: 700,698 bytes in 9,375 blocks ==870441== Reachable blocks (those to which a pointer was found) are not shown. ==870441== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==870441== ==870441== For lists of detected and suppressed errors, rerun with: -s ==870441== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)