==960068== Memcheck, a memory error detector ==960068== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==960068== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==960068== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellPopulationBoundaryConditionTutorial -malloc_debug -malloc_dump -memory_info ==960068== Parent PID: 944923 ==960068== ==960068== ==960068== FILE DESCRIPTORS: 9 open (3 std) at exit. ==960068== Open file descriptor 12: ==960068== at 0x1004722D: pipe (pipe.c:29) ==960068== by 0x18A0507D: ??? ==960068== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==960068== by 0xF94F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==960068== by 0xF8E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==960068== by 0xE5DFD38: PetscInitialize (pinit.c:924) ==960068== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==960068== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==960068== by 0x1440C1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==960068== by 0x13EFBF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==960068== by 0x1416A6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==960068== by 0x1415A2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==960068== by 0x141BB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==960068== by 0x13D7B5: main (TestCreatingAndUsingANewCellPopulationBoundaryConditionTutorial.cpp:18) ==960068== ==960068== Open file descriptor 8: /dev/shm/open_mpi.0000 ==960068== at 0x1004BBCC: __open_nocancel (open64_nocancel.c:39) ==960068== by 0xFFCFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==960068== by 0xE489822: ??? ==960068== by 0xE48996F: ??? ==960068== by 0x1400F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==960068== by 0x1400F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==960068== by 0x13FC5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==960068== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==960068== by 0xF94F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==960068== by 0xF8E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==960068== by 0xE5DFD38: PetscInitialize (pinit.c:924) ==960068== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==960068== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==960068== by 0x1440C1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==960068== by 0x13EFBF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==960068== by 0x1416A6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==960068== by 0x1415A2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==960068== by 0x141BB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==960068== by 0x13D7B5: main (TestCreatingAndUsingANewCellPopulationBoundaryConditionTutorial.cpp:18) ==960068== ==960068== Open file descriptor 116: ==960068== ==960068== ==960068== Open file descriptor 112: ==960068== ==960068== ==960068== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellPopulationBoundaryConditionTutorial_valgrind.txt ==960068== ==960068== ==960068== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==960068== ==960068== ==960068== ==960068== HEAP SUMMARY: ==960068== in use at exit: 700,754 bytes in 9,378 blocks ==960068== total heap usage: 428,298 allocs, 418,920 frees, 1,408,517,213 bytes allocated ==960068== ==960068== LEAK SUMMARY: ==960068== definitely lost: 0 bytes in 0 blocks ==960068== indirectly lost: 0 bytes in 0 blocks ==960068== possibly lost: 0 bytes in 0 blocks ==960068== still reachable: 56 bytes in 3 blocks ==960068== suppressed: 700,698 bytes in 9,375 blocks ==960068== Reachable blocks (those to which a pointer was found) are not shown. ==960068== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==960068== ==960068== For lists of detected and suppressed errors, rerun with: -s ==960068== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)