==962961== Memcheck, a memory error detector ==962961== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==962961== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==962961== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestMonodomainProblem -malloc_debug -malloc_dump -memory_info ==962961== Parent PID: 944923 ==962961== ==962961== Warning: invalid file descriptor -1 in syscall close() ==962961== ==962961== FILE DESCRIPTORS: 9 open (3 std) at exit. ==962961== Open file descriptor 12: ==962961== at 0xBD5B22D: pipe (pipe.c:29) ==962961== by 0x13F8307D: ??? ==962961== by 0xFC444CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==962961== by 0xB649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==962961== by 0xB5E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==962961== by 0x9F24D38: PetscInitialize (pinit.c:924) ==962961== by 0x9D98153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==962961== by 0x9D981A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==962961== by 0x14A2B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==962961== by 0x14182D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==962961== by 0x144A20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==962961== by 0x1448C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==962961== by 0x144F57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==962961== by 0x13FC05: main (TestMonodomainProblem.cpp:19) ==962961== ==962961== Open file descriptor 8: /dev/shm/open_mpi.0000 ==962961== at 0xBD5FBCC: __open_nocancel (open64_nocancel.c:39) ==962961== by 0xBCE3C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==962961== by 0x9DCC822: ??? ==962961== by 0x9DCC96F: ??? ==962961== by 0xFCE96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==962961== by 0xFCE9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==962961== by 0xFC9F922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==962961== by 0xFC442DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==962961== by 0xB649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==962961== by 0xB5E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==962961== by 0x9F24D38: PetscInitialize (pinit.c:924) ==962961== by 0x9D98153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==962961== by 0x9D981A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==962961== by 0x14A2B6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==962961== by 0x14182D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==962961== by 0x144A20: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==962961== by 0x1448C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==962961== by 0x144F57: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==962961== by 0x13FC05: main (TestMonodomainProblem.cpp:19) ==962961== ==962961== Open file descriptor 116: ==962961== ==962961== ==962961== Open file descriptor 112: ==962961== ==962961== ==962961== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMonodomainProblem_valgrind.txt ==962961== ==962961== ==962961== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==962961== ==962961== ==962961== ==962961== HEAP SUMMARY: ==962961== in use at exit: 701,150 bytes in 9,383 blocks ==962961== total heap usage: 6,620,315 allocs, 6,610,932 frees, 4,033,882,720 bytes allocated ==962961== ==962961== LEAK SUMMARY: ==962961== definitely lost: 0 bytes in 0 blocks ==962961== indirectly lost: 0 bytes in 0 blocks ==962961== possibly lost: 0 bytes in 0 blocks ==962961== still reachable: 24 bytes in 2 blocks ==962961== suppressed: 701,126 bytes in 9,381 blocks ==962961== Reachable blocks (those to which a pointer was found) are not shown. ==962961== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==962961== ==962961== For lists of detected and suppressed errors, rerun with: -s ==962961== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 128 from 34)