==946652== Memcheck, a memory error detector ==946652== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==946652== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==946652== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulationWithBuskeUpdate -malloc_debug -malloc_dump -memory_info ==946652== Parent PID: 944923 ==946652== ==946652== ==946652== FILE DESCRIPTORS: 9 open (3 std) at exit. ==946652== Open file descriptor 12: ==946652== at 0xEB9022D: pipe (pipe.c:29) ==946652== by 0x18A0507D: ??? ==946652== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==946652== by 0x107EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==946652== by 0x10787D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==946652== by 0xF47CD38: PetscInitialize (pinit.c:924) ==946652== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==946652== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==946652== by 0x2CC5B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==946652== by 0x2C3A9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==946652== by 0x2C7EB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==946652== by 0x2C7DB3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==946652== by 0x2C83C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==946652== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==946652== ==946652== Open file descriptor 8: /dev/shm/open_mpi.0000 ==946652== at 0xEB94BCC: __open_nocancel (open64_nocancel.c:39) ==946652== by 0xEB18C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==946652== by 0xE489822: ??? ==946652== by 0xE48996F: ??? ==946652== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==946652== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==946652== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==946652== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==946652== by 0x107EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==946652== by 0x10787D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==946652== by 0xF47CD38: PetscInitialize (pinit.c:924) ==946652== by 0xE455153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==946652== by 0xE4551A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==946652== by 0x2CC5B8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==946652== by 0x2C3A9F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==946652== by 0x2C7EB8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==946652== by 0x2C7DB3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==946652== by 0x2C83C7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==946652== by 0x2C2295: main (TestNodeBasedCellPopulationWithBuskeUpdate.cpp:18) ==946652== ==946652== Open file descriptor 116: ==946652== ==946652== ==946652== Open file descriptor 112: ==946652== ==946652== ==946652== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulationWithBuskeUpdate_valgrind.txt ==946652== ==946652== ==946652== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==946652== ==946652== ==946652== ==946652== HEAP SUMMARY: ==946652== in use at exit: 700,754 bytes in 9,378 blocks ==946652== total heap usage: 58,738 allocs, 49,360 frees, 1,355,240,486 bytes allocated ==946652== ==946652== LEAK SUMMARY: ==946652== definitely lost: 0 bytes in 0 blocks ==946652== indirectly lost: 0 bytes in 0 blocks ==946652== possibly lost: 0 bytes in 0 blocks ==946652== still reachable: 56 bytes in 3 blocks ==946652== suppressed: 700,698 bytes in 9,375 blocks ==946652== Reachable blocks (those to which a pointer was found) are not shown. ==946652== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==946652== ==946652== For lists of detected and suppressed errors, rerun with: -s ==946652== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)