==959635== Memcheck, a memory error detector ==959635== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==959635== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==959635== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==959635== Parent PID: 944923 ==959635== ==959635== ==959635== FILE DESCRIPTORS: 9 open (3 std) at exit. ==959635== Open file descriptor 12: ==959635== at 0xEFD422D: pipe (pipe.c:29) ==959635== by 0x18A0407D: ??? ==959635== by 0x140074CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==959635== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==959635== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==959635== by 0xF565D38: PetscInitialize (pinit.c:924) ==959635== by 0xE7F2153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==959635== by 0xE7F21A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==959635== by 0x135852: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==959635== by 0x1303E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==959635== by 0x133068: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==959635== by 0x132F08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==959635== by 0x13359F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==959635== by 0x12E7D5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==959635== ==959635== Open file descriptor 8: /dev/shm/open_mpi.0000 ==959635== at 0xEFD8BCC: __open_nocancel (open64_nocancel.c:39) ==959635== by 0xEF5CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==959635== by 0xE826822: ??? ==959635== by 0xE82696F: ??? ==959635== by 0x140AC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==959635== by 0x140AC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==959635== by 0x14062922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==959635== by 0x140072DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==959635== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==959635== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==959635== by 0xF565D38: PetscInitialize (pinit.c:924) ==959635== by 0xE7F2153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==959635== by 0xE7F21A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==959635== by 0x135852: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==959635== by 0x1303E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==959635== by 0x133068: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==959635== by 0x132F08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==959635== by 0x13359F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==959635== by 0x12E7D5: main (TestOnLatticeSimulationWithPdes.cpp:19) ==959635== ==959635== Open file descriptor 116: ==959635== ==959635== ==959635== Open file descriptor 112: ==959635== ==959635== ==959635== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==959635== ==959635== ==959635== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==959635== ==959635== ==959635== ==959635== HEAP SUMMARY: ==959635== in use at exit: 700,754 bytes in 9,378 blocks ==959635== total heap usage: 2,358,529 allocs, 2,349,151 frees, 1,791,517,652 bytes allocated ==959635== ==959635== LEAK SUMMARY: ==959635== definitely lost: 0 bytes in 0 blocks ==959635== indirectly lost: 0 bytes in 0 blocks ==959635== possibly lost: 0 bytes in 0 blocks ==959635== still reachable: 56 bytes in 3 blocks ==959635== suppressed: 700,698 bytes in 9,375 blocks ==959635== Reachable blocks (those to which a pointer was found) are not shown. ==959635== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==959635== ==959635== For lists of detected and suppressed errors, rerun with: -s ==959635== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)