==960603== Memcheck, a memory error detector ==960603== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==960603== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==960603== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==960603== Parent PID: 944923 ==960603== ==960603== ==960603== FILE DESCRIPTORS: 9 open (3 std) at exit. ==960603== Open file descriptor 12: ==960603== at 0x11B4A22D: pipe (pipe.c:29) ==960603== by 0x1A6C607D: ??? ==960603== by 0x1587B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==960603== by 0x11454418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==960603== by 0x113EDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==960603== by 0x100E2D38: PetscInitialize (pinit.c:924) ==960603== by 0xFF58153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==960603== by 0xFF581A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==960603== by 0x135A69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==960603== by 0x13035D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==960603== by 0x13310C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==960603== by 0x132FAC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==960603== by 0x133643: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==960603== by 0x12E785: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==960603== ==960603== Open file descriptor 8: /dev/shm/open_mpi.0000 ==960603== at 0x11B4EBCC: __open_nocancel (open64_nocancel.c:39) ==960603== by 0x11AD2C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==960603== by 0xFF8C822: ??? ==960603== by 0xFF8C96F: ??? ==960603== by 0x159206DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==960603== by 0x15920938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==960603== by 0x158D6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==960603== by 0x1587B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==960603== by 0x11454418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==960603== by 0x113EDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==960603== by 0x100E2D38: PetscInitialize (pinit.c:924) ==960603== by 0xFF58153: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==960603== by 0xFF581A1: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==960603== by 0x135A69: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==960603== by 0x13035D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==960603== by 0x13310C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==960603== by 0x132FAC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==960603== by 0x133643: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==960603== by 0x12E785: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==960603== ==960603== Open file descriptor 116: ==960603== ==960603== ==960603== Open file descriptor 112: ==960603== ==960603== ==960603== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==960603== ==960603== ==960603== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==960603== ==960603== ==960603== ==960603== HEAP SUMMARY: ==960603== in use at exit: 700,738 bytes in 9,377 blocks ==960603== total heap usage: 521,201 allocs, 511,824 frees, 1,562,151,910 bytes allocated ==960603== ==960603== LEAK SUMMARY: ==960603== definitely lost: 0 bytes in 0 blocks ==960603== indirectly lost: 0 bytes in 0 blocks ==960603== possibly lost: 0 bytes in 0 blocks ==960603== still reachable: 24 bytes in 2 blocks ==960603== suppressed: 700,714 bytes in 9,375 blocks ==960603== Reachable blocks (those to which a pointer was found) are not shown. ==960603== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==960603== ==960603== For lists of detected and suppressed errors, rerun with: -s ==960603== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)