==1004518== Memcheck, a memory error detector ==1004518== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1004518== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1004518== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==1004518== Parent PID: 1002846 ==1004518== ==1004518== ==1004518== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1004518== Open file descriptor 12: ==1004518== at 0xDCC122D: pipe (pipe.c:29) ==1004518== by 0x1977807D: ??? ==1004518== by 0x14D7B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1004518== by 0x11562418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1004518== by 0x114FBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1004518== by 0x101F2D38: PetscInitialize (pinit.c:924) ==1004518== by 0xD5832DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1004518== by 0xD58332D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1004518== by 0x132B66: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1004518== by 0x12BE63: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1004518== by 0x12E9B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1004518== by 0x12E8B3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1004518== by 0x12EEC7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1004518== by 0x12A665: main (TestCaUpdateRules.cpp:18) ==1004518== ==1004518== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1004518== at 0xDCC5BCC: __open_nocancel (open64_nocancel.c:39) ==1004518== by 0xDC49C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1004518== by 0xD5B8822: ??? ==1004518== by 0xD5B896F: ??? ==1004518== by 0x14E206DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1004518== by 0x14E20938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1004518== by 0x14DD6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1004518== by 0x14D7B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1004518== by 0x11562418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1004518== by 0x114FBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1004518== by 0x101F2D38: PetscInitialize (pinit.c:924) ==1004518== by 0xD5832DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1004518== by 0xD58332D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1004518== by 0x132B66: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1004518== by 0x12BE63: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1004518== by 0x12E9B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1004518== by 0x12E8B3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1004518== by 0x12EEC7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1004518== by 0x12A665: main (TestCaUpdateRules.cpp:18) ==1004518== ==1004518== Open file descriptor 116: ==1004518== ==1004518== ==1004518== Open file descriptor 112: ==1004518== ==1004518== ==1004518== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==1004518== ==1004518== ==1004518== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1004518== ==1004518== ==1004518== ==1004518== HEAP SUMMARY: ==1004518== in use at exit: 700,759 bytes in 9,378 blocks ==1004518== total heap usage: 58,071 allocs, 48,693 frees, 1,354,264,193 bytes allocated ==1004518== ==1004518== LEAK SUMMARY: ==1004518== definitely lost: 0 bytes in 0 blocks ==1004518== indirectly lost: 0 bytes in 0 blocks ==1004518== possibly lost: 0 bytes in 0 blocks ==1004518== still reachable: 56 bytes in 3 blocks ==1004518== suppressed: 700,703 bytes in 9,375 blocks ==1004518== Reachable blocks (those to which a pointer was found) are not shown. ==1004518== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1004518== ==1004518== For lists of detected and suppressed errors, rerun with: -s ==1004518== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)