==1004194== Memcheck, a memory error detector ==1004194== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1004194== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1004194== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellBasedEllipticPdeSolver -malloc_debug -malloc_dump -memory_info ==1004194== Parent PID: 1002846 ==1004194== ==1004194== ==1004194== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1004194== Open file descriptor 12: ==1004194== at 0x1115522D: pipe (pipe.c:29) ==1004194== by 0x1977907D: ??? ==1004194== by 0x14D7C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1004194== by 0x11649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1004194== by 0x115E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1004194== by 0xF71DD38: PetscInitialize (pinit.c:924) ==1004194== by 0xF5F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1004194== by 0xF5F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1004194== by 0x13C922: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1004194== by 0x137A33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1004194== by 0x13A5DA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1004194== by 0x13A4D5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1004194== by 0x13AAE9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1004194== by 0x136235: main (TestCellBasedEllipticPdeSolver.cpp:18) ==1004194== ==1004194== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1004194== at 0x11159BCC: __open_nocancel (open64_nocancel.c:39) ==1004194== by 0x110DDC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1004194== by 0x109A7822: ??? ==1004194== by 0x109A796F: ??? ==1004194== by 0x14E216DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1004194== by 0x14E21938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1004194== by 0x14DD7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1004194== by 0x14D7C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1004194== by 0x11649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1004194== by 0x115E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1004194== by 0xF71DD38: PetscInitialize (pinit.c:924) ==1004194== by 0xF5F42DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1004194== by 0xF5F432D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1004194== by 0x13C922: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1004194== by 0x137A33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1004194== by 0x13A5DA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1004194== by 0x13A4D5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1004194== by 0x13AAE9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1004194== by 0x136235: main (TestCellBasedEllipticPdeSolver.cpp:18) ==1004194== ==1004194== Open file descriptor 116: ==1004194== ==1004194== ==1004194== Open file descriptor 112: ==1004194== ==1004194== ==1004194== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBasedEllipticPdeSolver_valgrind.txt ==1004194== ==1004194== ==1004194== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1004194== ==1004194== ==1004194== ==1004194== HEAP SUMMARY: ==1004194== in use at exit: 700,727 bytes in 9,377 blocks ==1004194== total heap usage: 57,713 allocs, 48,336 frees, 1,354,524,129 bytes allocated ==1004194== ==1004194== LEAK SUMMARY: ==1004194== definitely lost: 0 bytes in 0 blocks ==1004194== indirectly lost: 0 bytes in 0 blocks ==1004194== possibly lost: 0 bytes in 0 blocks ==1004194== still reachable: 24 bytes in 2 blocks ==1004194== suppressed: 700,703 bytes in 9,375 blocks ==1004194== Reachable blocks (those to which a pointer was found) are not shown. ==1004194== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1004194== ==1004194== For lists of detected and suppressed errors, rerun with: -s ==1004194== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)