==1018703== Memcheck, a memory error detector ==1018703== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1018703== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1018703== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCellBetaCateninWriter -malloc_debug -malloc_dump -memory_info ==1018703== Parent PID: 1002846 ==1018703== ==1018703== ==1018703== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1018703== Open file descriptor 12: ==1018703== at 0x111C622D: pipe (pipe.c:29) ==1018703== by 0x1B43B07D: ??? ==1018703== by 0x1663D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1018703== by 0x12F09418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018703== by 0x12EA2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018703== by 0x11B99D38: PetscInitialize (pinit.c:924) ==1018703== by 0x10A882DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1018703== by 0x10A8832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1018703== by 0x135ECE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1018703== by 0x12F123: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1018703== by 0x131B76: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1018703== by 0x131A71: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1018703== by 0x132085: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1018703== by 0x12D925: main (TestCellBetaCateninWriter.cpp:18) ==1018703== ==1018703== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1018703== at 0x111CABCC: __open_nocancel (open64_nocancel.c:39) ==1018703== by 0x1114EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1018703== by 0x10ABD822: ??? ==1018703== by 0x10ABD96F: ??? ==1018703== by 0x166E26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018703== by 0x166E2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018703== by 0x16698922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018703== by 0x1663D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1018703== by 0x12F09418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018703== by 0x12EA2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018703== by 0x11B99D38: PetscInitialize (pinit.c:924) ==1018703== by 0x10A882DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1018703== by 0x10A8832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1018703== by 0x135ECE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1018703== by 0x12F123: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1018703== by 0x131B76: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1018703== by 0x131A71: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1018703== by 0x132085: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1018703== by 0x12D925: main (TestCellBetaCateninWriter.cpp:18) ==1018703== ==1018703== Open file descriptor 116: ==1018703== ==1018703== ==1018703== Open file descriptor 112: ==1018703== ==1018703== ==1018703== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellBetaCateninWriter_valgrind.txt ==1018703== ==1018703== ==1018703== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1018703== ==1018703== ==1018703== ==1018703== HEAP SUMMARY: ==1018703== in use at exit: 700,855 bytes in 9,379 blocks ==1018703== total heap usage: 65,602 allocs, 56,223 frees, 1,356,174,569 bytes allocated ==1018703== ==1018703== LEAK SUMMARY: ==1018703== definitely lost: 0 bytes in 0 blocks ==1018703== indirectly lost: 0 bytes in 0 blocks ==1018703== possibly lost: 0 bytes in 0 blocks ==1018703== still reachable: 136 bytes in 4 blocks ==1018703== suppressed: 700,719 bytes in 9,375 blocks ==1018703== Reachable blocks (those to which a pointer was found) are not shown. ==1018703== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1018703== ==1018703== For lists of detected and suppressed errors, rerun with: -s ==1018703== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)