==1018055== Memcheck, a memory error detector ==1018055== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1018055== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1018055== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellCycleModelTutorial -malloc_debug -malloc_dump -memory_info ==1018055== Parent PID: 1002846 ==1018055== ==1018055== ==1018055== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1018055== Open file descriptor 12: ==1018055== at 0x10EA222D: pipe (pipe.c:29) ==1018055== by 0x1977807D: ??? ==1018055== by 0x14CF34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1018055== by 0x106C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018055== by 0x1065CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018055== by 0xF353D38: PetscInitialize (pinit.c:924) ==1018055== by 0xF1C82DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1018055== by 0xF1C832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1018055== by 0x2258B3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1018055== by 0x21F2CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1018055== by 0x222B80: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1018055== by 0x222A21: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1018055== by 0x2230B7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1018055== by 0x21BBF5: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==1018055== ==1018055== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1018055== at 0x10EA6BCC: __open_nocancel (open64_nocancel.c:39) ==1018055== by 0x10E2AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1018055== by 0xF1FD822: ??? ==1018055== by 0xF1FD96F: ??? ==1018055== by 0x14D986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018055== by 0x14D98938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018055== by 0x14D4E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018055== by 0x14CF32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1018055== by 0x106C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018055== by 0x1065CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018055== by 0xF353D38: PetscInitialize (pinit.c:924) ==1018055== by 0xF1C82DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1018055== by 0xF1C832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1018055== by 0x2258B3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1018055== by 0x21F2CB: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1018055== by 0x222B80: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1018055== by 0x222A21: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1018055== by 0x2230B7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1018055== by 0x21BBF5: main (TestCreatingAndUsingANewCellCycleModelTutorial.cpp:19) ==1018055== ==1018055== Open file descriptor 116: ==1018055== ==1018055== ==1018055== Open file descriptor 112: ==1018055== ==1018055== ==1018055== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellCycleModelTutorial_valgrind.txt ==1018055== ==1018055== ==1018055== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1018055== ==1018055== ==1018055== ==1018055== HEAP SUMMARY: ==1018055== in use at exit: 700,688 bytes in 9,374 blocks ==1018055== total heap usage: 8,979,353 allocs, 8,969,979 frees, 2,199,848,588 bytes allocated ==1018055== ==1018055== LEAK SUMMARY: ==1018055== definitely lost: 0 bytes in 0 blocks ==1018055== indirectly lost: 0 bytes in 0 blocks ==1018055== possibly lost: 0 bytes in 0 blocks ==1018055== still reachable: 56 bytes in 3 blocks ==1018055== suppressed: 700,632 bytes in 9,371 blocks ==1018055== Reachable blocks (those to which a pointer was found) are not shown. ==1018055== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1018055== ==1018055== For lists of detected and suppressed errors, rerun with: -s ==1018055== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)