==1018182== Memcheck, a memory error detector ==1018182== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1018182== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1018182== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellMutationStateTutorial -malloc_debug -malloc_dump -memory_info ==1018182== Parent PID: 1002846 ==1018182== ==1018182== ==1018182== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1018182== Open file descriptor 12: ==1018182== at 0x10DBB22D: pipe (pipe.c:29) ==1018182== by 0x1977807D: ??? ==1018182== by 0x14CF34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1018182== by 0x106C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018182== by 0x1065CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018182== by 0xF353D38: PetscInitialize (pinit.c:924) ==1018182== by 0xF1C82DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1018182== by 0xF1C832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1018182== by 0x149943: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1018182== by 0x1442F9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1018182== by 0x146FF2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1018182== by 0x146E92: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1018182== by 0x147529: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1018182== by 0x142715: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==1018182== ==1018182== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1018182== at 0x10DBFBCC: __open_nocancel (open64_nocancel.c:39) ==1018182== by 0x10D43C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1018182== by 0xF1FD822: ??? ==1018182== by 0xF1FD96F: ??? ==1018182== by 0x14D986DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018182== by 0x14D98938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018182== by 0x14D4E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018182== by 0x14CF32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1018182== by 0x106C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018182== by 0x1065CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018182== by 0xF353D38: PetscInitialize (pinit.c:924) ==1018182== by 0xF1C82DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1018182== by 0xF1C832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1018182== by 0x149943: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1018182== by 0x1442F9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1018182== by 0x146FF2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1018182== by 0x146E92: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1018182== by 0x147529: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1018182== by 0x142715: main (TestCreatingAndUsingANewCellMutationStateTutorial.cpp:19) ==1018182== ==1018182== Open file descriptor 116: ==1018182== ==1018182== ==1018182== Open file descriptor 112: ==1018182== ==1018182== ==1018182== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellMutationStateTutorial_valgrind.txt ==1018182== ==1018182== ==1018182== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1018182== ==1018182== ==1018182== ==1018182== HEAP SUMMARY: ==1018182== in use at exit: 700,688 bytes in 9,374 blocks ==1018182== total heap usage: 4,265,355 allocs, 4,255,981 frees, 1,913,664,182 bytes allocated ==1018182== ==1018182== LEAK SUMMARY: ==1018182== definitely lost: 0 bytes in 0 blocks ==1018182== indirectly lost: 0 bytes in 0 blocks ==1018182== possibly lost: 0 bytes in 0 blocks ==1018182== still reachable: 56 bytes in 3 blocks ==1018182== suppressed: 700,632 bytes in 9,371 blocks ==1018182== Reachable blocks (those to which a pointer was found) are not shown. ==1018182== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1018182== ==1018182== For lists of detected and suppressed errors, rerun with: -s ==1018182== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)