==1018813== Memcheck, a memory error detector ==1018813== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1018813== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1018813== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1018813== Parent PID: 1002846 ==1018813== ==1018813== ==1018813== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1018813== Open file descriptor 12: ==1018813== at 0x1267B22D: pipe (pipe.c:29) ==1018813== by 0x1B43A07D: ??? ==1018813== by 0x165A04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1018813== by 0x11F83418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018813== by 0x11F1CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018813== by 0x10C13D38: PetscInitialize (pinit.c:924) ==1018813== by 0x10A882DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1018813== by 0x10A8832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1018813== by 0x22445D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1018813== by 0x21BE99: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1018813== by 0x21FAA0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1018813== by 0x21F940: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1018813== by 0x21FFD7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1018813== by 0x21A2B5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==1018813== ==1018813== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1018813== at 0x1267FBCC: __open_nocancel (open64_nocancel.c:39) ==1018813== by 0x12603C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1018813== by 0x10ABD822: ??? ==1018813== by 0x10ABD96F: ??? ==1018813== by 0x166456DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018813== by 0x16645938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018813== by 0x165FB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018813== by 0x165A02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1018813== by 0x11F83418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018813== by 0x11F1CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018813== by 0x10C13D38: PetscInitialize (pinit.c:924) ==1018813== by 0x10A882DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1018813== by 0x10A8832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1018813== by 0x22445D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1018813== by 0x21BE99: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1018813== by 0x21FAA0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1018813== by 0x21F940: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1018813== by 0x21FFD7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1018813== by 0x21A2B5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==1018813== ==1018813== Open file descriptor 116: ==1018813== ==1018813== ==1018813== Open file descriptor 112: ==1018813== ==1018813== ==1018813== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithVertexBasedCellPopulation_valgrind.txt ==1018813== ==1018813== ==1018813== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1018813== ==1018813== ==1018813== ==1018813== HEAP SUMMARY: ==1018813== in use at exit: 700,704 bytes in 9,374 blocks ==1018813== total heap usage: 3,720,573 allocs, 3,711,199 frees, 1,636,759,239 bytes allocated ==1018813== ==1018813== LEAK SUMMARY: ==1018813== definitely lost: 0 bytes in 0 blocks ==1018813== indirectly lost: 0 bytes in 0 blocks ==1018813== possibly lost: 0 bytes in 0 blocks ==1018813== still reachable: 56 bytes in 3 blocks ==1018813== suppressed: 700,648 bytes in 9,371 blocks ==1018813== Reachable blocks (those to which a pointer was found) are not shown. ==1018813== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1018813== ==1018813== For lists of detected and suppressed errors, rerun with: -s ==1018813== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)