==1003934== Memcheck, a memory error detector ==1003934== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1003934== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1003934== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/pde/test/TestHdf5Converters -malloc_debug -malloc_dump -memory_info ==1003934== Parent PID: 1002846 ==1003934== ==1003934== ==1003934== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1003934== Open file descriptor 12: ==1003934== at 0x732A22D: pipe (pipe.c:29) ==1003934== by 0x104BD07D: ??? ==1003934== by 0xC5EC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1003934== by 0x8D9F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003934== by 0x8D38D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003934== by 0x7678D38: PetscInitialize (pinit.c:924) ==1003934== by 0x68DC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1003934== by 0x68DC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1003934== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1003934== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1003934== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1003934== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1003934== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1003934== by 0x11B235: main (TestHdf5Converters.cpp:18) ==1003934== ==1003934== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1003934== at 0x732EBCC: __open_nocancel (open64_nocancel.c:39) ==1003934== by 0x72B2C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1003934== by 0x6911822: ??? ==1003934== by 0x691196F: ??? ==1003934== by 0xC6916DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1003934== by 0xC691938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1003934== by 0xC647922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1003934== by 0xC5EC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1003934== by 0x8D9F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003934== by 0x8D38D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003934== by 0x7678D38: PetscInitialize (pinit.c:924) ==1003934== by 0x68DC2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1003934== by 0x68DC32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1003934== by 0x1213EA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1003934== by 0x11CA33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1003934== by 0x11F486: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1003934== by 0x11F381: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1003934== by 0x11F995: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1003934== by 0x11B235: main (TestHdf5Converters.cpp:18) ==1003934== ==1003934== Open file descriptor 116: ==1003934== ==1003934== ==1003934== Open file descriptor 112: ==1003934== ==1003934== ==1003934== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5Converters_valgrind.txt ==1003934== ==1003934== ==1003934== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1003934== ==1003934== ==1003934== ==1003934== HEAP SUMMARY: ==1003934== in use at exit: 700,663 bytes in 9,377 blocks ==1003934== total heap usage: 208,921 allocs, 199,544 frees, 1,409,981,041 bytes allocated ==1003934== ==1003934== LEAK SUMMARY: ==1003934== definitely lost: 0 bytes in 0 blocks ==1003934== indirectly lost: 0 bytes in 0 blocks ==1003934== possibly lost: 0 bytes in 0 blocks ==1003934== still reachable: 24 bytes in 2 blocks ==1003934== suppressed: 700,639 bytes in 9,375 blocks ==1003934== Reachable blocks (those to which a pointer was found) are not shown. ==1003934== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1003934== ==1003934== For lists of detected and suppressed errors, rerun with: -s ==1003934== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)