==1005064== Memcheck, a memory error detector ==1005064== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1005064== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1005064== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1005064== Parent PID: 1002846 ==1005064== ==1005064== ==1005064== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1005064== Open file descriptor 12: ==1005064== at 0xF9ED22D: pipe (pipe.c:29) ==1005064== by 0x1977907D: ??? ==1005064== by 0x14D854CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1005064== by 0x11649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1005064== by 0x115E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1005064== by 0x102D9D38: PetscInitialize (pinit.c:924) ==1005064== by 0xF1C82DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1005064== by 0xF1C832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1005064== by 0x21262C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1005064== by 0x209E39: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1005064== by 0x20DA88: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1005064== by 0x20D928: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1005064== by 0x20DFBF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1005064== by 0x208255: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==1005064== ==1005064== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1005064== at 0xF9F1BCC: __open_nocancel (open64_nocancel.c:39) ==1005064== by 0xF975C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1005064== by 0xF1FD822: ??? ==1005064== by 0xF1FD96F: ??? ==1005064== by 0x14E2A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1005064== by 0x14E2A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1005064== by 0x14DE0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1005064== by 0x14D852DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1005064== by 0x11649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1005064== by 0x115E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1005064== by 0x102D9D38: PetscInitialize (pinit.c:924) ==1005064== by 0xF1C82DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1005064== by 0xF1C832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1005064== by 0x21262C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1005064== by 0x209E39: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1005064== by 0x20DA88: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1005064== by 0x20D928: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1005064== by 0x20DFBF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1005064== by 0x208255: main (TestOffLatticeSimulationWithNodeBasedCellPopulation.cpp:19) ==1005064== ==1005064== Open file descriptor 116: ==1005064== ==1005064== ==1005064== Open file descriptor 112: ==1005064== ==1005064== ==1005064== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulation_valgrind.txt ==1005064== ==1005064== ==1005064== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1005064== ==1005064== ==1005064== ==1005064== HEAP SUMMARY: ==1005064== in use at exit: 700,720 bytes in 9,375 blocks ==1005064== total heap usage: 17,975,046 allocs, 17,965,671 frees, 30,089,600,024 bytes allocated ==1005064== ==1005064== LEAK SUMMARY: ==1005064== definitely lost: 0 bytes in 0 blocks ==1005064== indirectly lost: 0 bytes in 0 blocks ==1005064== possibly lost: 0 bytes in 0 blocks ==1005064== still reachable: 88 bytes in 4 blocks ==1005064== suppressed: 700,632 bytes in 9,371 blocks ==1005064== Reachable blocks (those to which a pointer was found) are not shown. ==1005064== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1005064== ==1005064== For lists of detected and suppressed errors, rerun with: -s ==1005064== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)