==1005236== Memcheck, a memory error detector ==1005236== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1005236== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1005236== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==1005236== Parent PID: 1002846 ==1005236== ==1005236== ==1005236== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1005236== Open file descriptor 12: ==1005236== at 0xFD8A22D: pipe (pipe.c:29) ==1005236== by 0x1977907D: ??? ==1005236== by 0x14D7C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1005236== by 0x11649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1005236== by 0x115E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1005236== by 0x102D9D38: PetscInitialize (pinit.c:924) ==1005236== by 0xF5652DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1005236== by 0xF56532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1005236== by 0x22552E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1005236== by 0x21EBB1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1005236== by 0x22271C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1005236== by 0x2225BC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1005236== by 0x222C53: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1005236== by 0x21CF95: main (TestOffLatticeSimulationWithPdes.cpp:19) ==1005236== ==1005236== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1005236== at 0xFD8EBCC: __open_nocancel (open64_nocancel.c:39) ==1005236== by 0xFD12C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1005236== by 0xF59A822: ??? ==1005236== by 0xF59A96F: ??? ==1005236== by 0x14E216DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1005236== by 0x14E21938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1005236== by 0x14DD7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1005236== by 0x14D7C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1005236== by 0x11649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1005236== by 0x115E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1005236== by 0x102D9D38: PetscInitialize (pinit.c:924) ==1005236== by 0xF5652DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1005236== by 0xF56532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1005236== by 0x22552E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1005236== by 0x21EBB1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1005236== by 0x22271C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1005236== by 0x2225BC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1005236== by 0x222C53: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1005236== by 0x21CF95: main (TestOffLatticeSimulationWithPdes.cpp:19) ==1005236== ==1005236== Open file descriptor 116: ==1005236== ==1005236== ==1005236== Open file descriptor 112: ==1005236== ==1005236== ==1005236== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==1005236== ==1005236== ==1005236== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1005236== ==1005236== ==1005236== ==1005236== HEAP SUMMARY: ==1005236== in use at exit: 700,688 bytes in 9,374 blocks ==1005236== total heap usage: 7,488,950 allocs, 7,479,576 frees, 2,658,295,133 bytes allocated ==1005236== ==1005236== LEAK SUMMARY: ==1005236== definitely lost: 0 bytes in 0 blocks ==1005236== indirectly lost: 0 bytes in 0 blocks ==1005236== possibly lost: 0 bytes in 0 blocks ==1005236== still reachable: 56 bytes in 3 blocks ==1005236== suppressed: 700,632 bytes in 9,371 blocks ==1005236== Reachable blocks (those to which a pointer was found) are not shown. ==1005236== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1005236== ==1005236== For lists of detected and suppressed errors, rerun with: -s ==1005236== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)