==1011219== Memcheck, a memory error detector ==1011219== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1011219== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1011219== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1011219== Parent PID: 1002846 ==1011219== ==1011219== ==1011219== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1011219== Open file descriptor 12: ==1011219== at 0xF9ED22D: pipe (pipe.c:29) ==1011219== by 0x1977907D: ??? ==1011219== by 0x14D854CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1011219== by 0x11649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1011219== by 0x115E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1011219== by 0x102D9D38: PetscInitialize (pinit.c:924) ==1011219== by 0xF1C82DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1011219== by 0xF1C832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1011219== by 0x1D6650: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1011219== by 0x1CE199: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1011219== by 0x1D1A18: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1011219== by 0x1D18B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1011219== by 0x1D1F4F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1011219== by 0x1CC5B5: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==1011219== ==1011219== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1011219== at 0xF9F1BCC: __open_nocancel (open64_nocancel.c:39) ==1011219== by 0xF975C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1011219== by 0xF1FD822: ??? ==1011219== by 0xF1FD96F: ??? ==1011219== by 0x14E2A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1011219== by 0x14E2A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1011219== by 0x14DE0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1011219== by 0x14D852DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1011219== by 0x11649418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1011219== by 0x115E2D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1011219== by 0x102D9D38: PetscInitialize (pinit.c:924) ==1011219== by 0xF1C82DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1011219== by 0xF1C832D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1011219== by 0x1D6650: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1011219== by 0x1CE199: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1011219== by 0x1D1A18: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1011219== by 0x1D18B8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1011219== by 0x1D1F4F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1011219== by 0x1CC5B5: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==1011219== ==1011219== Open file descriptor 116: ==1011219== ==1011219== ==1011219== Open file descriptor 112: ==1011219== ==1011219== ==1011219== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==1011219== ==1011219== ==1011219== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1011219== ==1011219== ==1011219== ==1011219== HEAP SUMMARY: ==1011219== in use at exit: 700,704 bytes in 9,375 blocks ==1011219== total heap usage: 11,684,486 allocs, 11,675,111 frees, 2,223,682,582 bytes allocated ==1011219== ==1011219== LEAK SUMMARY: ==1011219== definitely lost: 0 bytes in 0 blocks ==1011219== indirectly lost: 0 bytes in 0 blocks ==1011219== possibly lost: 0 bytes in 0 blocks ==1011219== still reachable: 72 bytes in 4 blocks ==1011219== suppressed: 700,632 bytes in 9,371 blocks ==1011219== Reachable blocks (those to which a pointer was found) are not shown. ==1011219== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1011219== ==1011219== For lists of detected and suppressed errors, rerun with: -s ==1011219== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)