==1003110== Memcheck, a memory error detector ==1003110== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1003110== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1003110== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/io/test/TestParallelColumnDataReaderWriter -malloc_debug -malloc_dump -memory_info ==1003110== Parent PID: 1002846 ==1003110== ==1003110== ==1003110== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1003110== Open file descriptor 12: ==1003110== at 0x60A222D: pipe (pipe.c:29) ==1003110== by 0xAF1707D: ??? ==1003110== by 0x8F374CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1003110== by 0x6651418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003110== by 0x65EAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003110== by 0x4A96D38: PetscInitialize (pinit.c:924) ==1003110== by 0x496D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1003110== by 0x496D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1003110== by 0x11B354: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1003110== by 0x114A4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1003110== by 0x1174D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1003110== by 0x117378: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1003110== by 0x117A0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1003110== by 0x112E75: main (TestParallelColumnDataReaderWriter.cpp:19) ==1003110== ==1003110== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1003110== at 0x60A6BCC: __open_nocancel (open64_nocancel.c:39) ==1003110== by 0x602AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1003110== by 0x5D20822: ??? ==1003110== by 0x5D2096F: ??? ==1003110== by 0x8FDC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1003110== by 0x8FDC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1003110== by 0x8F92922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1003110== by 0x8F372DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1003110== by 0x6651418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003110== by 0x65EAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1003110== by 0x4A96D38: PetscInitialize (pinit.c:924) ==1003110== by 0x496D2DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1003110== by 0x496D32D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1003110== by 0x11B354: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1003110== by 0x114A4D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1003110== by 0x1174D8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1003110== by 0x117378: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1003110== by 0x117A0F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1003110== by 0x112E75: main (TestParallelColumnDataReaderWriter.cpp:19) ==1003110== ==1003110== Open file descriptor 116: ==1003110== ==1003110== ==1003110== Open file descriptor 112: ==1003110== ==1003110== ==1003110== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestParallelColumnDataReaderWriter_valgrind.txt ==1003110== ==1003110== ==1003110== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1003110== ==1003110== ==1003110== ==1003110== HEAP SUMMARY: ==1003110== in use at exit: 700,279 bytes in 9,377 blocks ==1003110== total heap usage: 48,409 allocs, 39,032 frees, 1,353,866,527 bytes allocated ==1003110== ==1003110== LEAK SUMMARY: ==1003110== definitely lost: 0 bytes in 0 blocks ==1003110== indirectly lost: 0 bytes in 0 blocks ==1003110== possibly lost: 0 bytes in 0 blocks ==1003110== still reachable: 24 bytes in 2 blocks ==1003110== suppressed: 700,255 bytes in 9,375 blocks ==1003110== Reachable blocks (those to which a pointer was found) are not shown. ==1003110== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1003110== ==1003110== For lists of detected and suppressed errors, rerun with: -s ==1003110== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)