==1018626== Memcheck, a memory error detector ==1018626== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1018626== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1018626== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestSingleOdeWntCellCycleModel -malloc_debug -malloc_dump -memory_info ==1018626== Parent PID: 1002846 ==1018626== ==1018626== ==1018626== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1018626== Open file descriptor 12: ==1018626== at 0x10A3822D: pipe (pipe.c:29) ==1018626== by 0x1B43A07D: ??? ==1018626== by 0x155894CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1018626== by 0x10340418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018626== by 0x102D9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018626== by 0xEFD0D38: PetscInitialize (pinit.c:924) ==1018626== by 0xEE452DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1018626== by 0xEE4532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1018626== by 0x18BB23: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1018626== by 0x184159: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1018626== by 0x187468: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1018626== by 0x187363: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1018626== by 0x187977: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1018626== by 0x181D95: main (TestSingleOdeWntCellCycleModel.cpp:18) ==1018626== ==1018626== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1018626== at 0x10A3CBCC: __open_nocancel (open64_nocancel.c:39) ==1018626== by 0x109C0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1018626== by 0xEE7A822: ??? ==1018626== by 0xEE7A96F: ??? ==1018626== by 0x1562E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018626== by 0x1562E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018626== by 0x155E4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1018626== by 0x155892DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1018626== by 0x10340418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018626== by 0x102D9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1018626== by 0xEFD0D38: PetscInitialize (pinit.c:924) ==1018626== by 0xEE452DF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1018626== by 0xEE4532D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1018626== by 0x18BB23: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1018626== by 0x184159: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1018626== by 0x187468: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1018626== by 0x187363: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1018626== by 0x187977: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1018626== by 0x181D95: main (TestSingleOdeWntCellCycleModel.cpp:18) ==1018626== ==1018626== Open file descriptor 116: ==1018626== ==1018626== ==1018626== Open file descriptor 112: ==1018626== ==1018626== ==1018626== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSingleOdeWntCellCycleModel_valgrind.txt ==1018626== ==1018626== ==1018626== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1018626== ==1018626== ==1018626== ==1018626== HEAP SUMMARY: ==1018626== in use at exit: 700,919 bytes in 9,380 blocks ==1018626== total heap usage: 265,422 allocs, 256,042 frees, 1,372,376,398 bytes allocated ==1018626== ==1018626== LEAK SUMMARY: ==1018626== definitely lost: 0 bytes in 0 blocks ==1018626== indirectly lost: 0 bytes in 0 blocks ==1018626== possibly lost: 0 bytes in 0 blocks ==1018626== still reachable: 200 bytes in 5 blocks ==1018626== suppressed: 700,719 bytes in 9,375 blocks ==1018626== Reachable blocks (those to which a pointer was found) are not shown. ==1018626== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1018626== ==1018626== For lists of detected and suppressed errors, rerun with: -s ==1018626== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)